Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00620 ATGGGAAGGAGTTTGAGTCCTGTGCTGCAAAGGGAGCTTGAAAATCTCGACAAAGACGCTGATAGTCGCAAATCCGCAATGAGAGCATTGAAGTCTTATGTGAAAGATTTGGACTTTAGGACAATTCCTATCTTTCTAGCTCAAGTGTCTGAAACTAAGGAAACCGGAACTTTGTCTGGAGAATTCACCATATCGCTATACGAGGTTCTTGCTAGGGTTCATGGTGTTAAAATTGTTCCGATGATTGAGAGTATCATGCAATCCATAATTCAGACTTTAGCTTCGAGTGCAGGATCTTTCCCTCTCCAACAAGCTTGTTCCAAGGTTGTTCCAGCTGTGGCAAGATACGGAATCGACCCTACAATGCCAGAAGATAAGAAGAAGAGTATAATTCGATCCATTTGTAAGCCGCTTTCTGATTCGCTCACGAGTTCTCAGGAGAGTTTGAGCTGCGGCGCAGCTCTTTGCTTGAAGGCACTTGTTGATTCGGATAATTGGCGGTATGCTTCTAATGAAATGGTTAATAACGTTTGCCAAAATGTTGCGGCGGCGTTAGATGGAAAGTCTACACAGAGTAATTCGCATATGGGTTTGGTTATGGCGTTAGCGAAGCGCAACTCTCTGATTGTTGAAGCATATGCTCGATTGCTCATACATTCCGGGCTTCAAATATTAAATGTCGGTGGAGAGCTTTCTGATGGGAATTCTCAGAAGAGGTTCTCAGCAATTCAAATGGTTAACTACTTGATGAAGTGTTTGGATCCGAGGAGTATTTTCTCGGAAGTCGAACAAGTGATCGAGGAGATGGAACAGTGCCAGTTCGACAAAATGGCATTCATCAAAGGTGCTGCACTTGAAGCCTTGCAAACAGCCAAGAAAGTCGCAACCGACAAAAAACTGAGATGTATGAAAAGTCCTGCATCCGTGACGGGTTCAAATTCAAATTTTAGTAGGAGAGACTATATGGAAGGGGATAGTTCTTCGGGTGACGGGGACCTTACTCCGGCATCTAATTCACCTGAGTCACGTACACTTGACTATTTCCCTGGACACGGATCCCTTACCGAATCGCCCATTTCGACTTTTCAGTCTTCTCATAATCTGAACTATTCGCGAAGGAGTGTCAACAGGAAGCTTTGGAGCCTTGAAAATGGAGGAGTGGATGTGTCTCTCAAGGATGGTTTGTTCTCATCAAATGCAGACGAGGGAAATGGCTTCTTCGATAACACTGCGGATCACAAGTTTTCCAATGCAAATGGAGATTTAACCGAAGAATTTGCTGGTTTTGTCCCTAGAAATCCTAGGCACGGAATATCCAGAAGTACCAACACAAGTCCCCTCAGATCGCGCACACAAGTCATTGAAGGCATTCAAATTTTCGAAACTCCAAAAAGGCTCATTCGTTCACTTCAAGACCCAACAGATGATAGTTCCGACTGTTCTGAAAAACCGATTAGACGGTACAAGAGTCTATCCTCAGGAAACATTATCTGGACTCCATCATCTAACTCCAAGTATAACCAGAACGGTACTGCTCATCACGTCAAATATGATGATAGCAACGAGAACGGAAGCTCATGTGGCGATGACATGCAGTATCAAGACGAACAAGAATCAGTCTCATCAACCGATGACATTCTTGGTAATTCTGATATGCAGAAGCCTTCCGAAATGGTTCCTGAGAATAGAAAAGTCTCACAAACTCTTCTCGCGGTAAAGCCACTTCAAAAGGCGAAGCGCAAATTCTTCTGTGGACTCTCTTTCCTCATTGTTGCGATGGCTACACCTTTACTCTGGATCAACAGTCAAGAAGAAGCACATTTCCTTGTCCCTACATAA 1839 0.4377 MGRSLSPVLQRELENLDKDADSRKSAMRALKSYVKDLDFRTIPIFLAQVSETKETGTLSGEFTISLYEVLARVHGVKIVPMIESIMQSIIQTLASSAGSFPLQQACSKVVPAVARYGIDPTMPEDKKKSIIRSICKPLSDSLTSSQESLSCGAALCLKALVDSDNWRYASNEMVNNVCQNVAAALDGKSTQSNSHMGLVMALAKRNSLIVEAYARLLIHSGLQILNVGGELSDGNSQKRFSAIQMVNYLMKCLDPRSIFSEVEQVIEEMEQCQFDKMAFIKGAALEALQTAKKVATDKKLRCMKSPASVTGSNSNFSRRDYMEGDSSSGDGDLTPASNSPESRTLDYFPGHGSLTESPISTFQSSHNLNYSRRSVNRKLWSLENGGVDVSLKDGLFSSNADEGNGFFDNTADHKFSNANGDLTEEFAGFVPRNPRHGISRSTNTSPLRSRTQVIEGIQIFETPKRLIRSLQDPTDDSSDCSEKPIRRYKSLSSGNIIWTPSSNSKYNQNGTAHHVKYDDSNENGSSCGDDMQYQDEQESVSSTDDILGNSDMQKPSEMVPENRKVSQTLLAVKPLQKAKRKFFCGLSFLIVAMATPLLWINSQEEAHFLVPT 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00620 612 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 3 554 IPR033337 GO:0005874|GO:0008017
Vivi4g00620 612 MobiDBLite consensus disorder prediction 429 448 - -
Vivi4g00620 612 MobiDBLite consensus disorder prediction 521 550 - -
Vivi4g00620 612 MobiDBLite consensus disorder prediction 330 344 - -
Vivi4g00620 612 MobiDBLite consensus disorder prediction 518 561 - -
Vivi4g00620 612 Gene3D - 3 305 IPR011989 -
Vivi4g00620 612 FunFam protein SINE1 isoform X1 2 318 - -
Vivi4g00620 612 MobiDBLite consensus disorder prediction 305 350 - -
Vivi4g00620 612 SUPERFAMILY ARM repeat 11 290 IPR016024 -
Vivi4g00620 612 MobiDBLite consensus disorder prediction 306 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00620 Vivi-Chr4 13746335 13749052 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00620 - - cam:101511812 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00620 4 13746335 13749052 Vivi4g00620 4 13746335 13749052 ECH
Vivi4g00620 4 13746335 13749052 Vivi4g00621 4 13746337 13749128 PCT