Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00616 ATGGCACAAGGTGTTTTTGGAGATAGTGGTTCTTACATGTACCCTCAAGGTTATGGTTATGCACCATATGGGTCCTATCCATCTCCCAGTTCATCTCCATCCCTTCCACCTGATGAAACGATTTATGGGATGCAACAGTACCAGTATCCTTCTTACTATCATCCTCCAGCTTCTGCCAATGGGACATATGGTGCTAACAAAATAAATGGTCATGGAGGGAAAACTTCAACTGATGTTACTGCTGAACATGTCCCTACATCAGTAATGAATAAAGGAAATGCCTCTACTGTGACAAATGGATATTCTTCAAATAACAATGGGGCAAATGATTCTTACCAAAGGGCTGGCTTTCCTGTGGCTGAATATCAAGATCCAAGAGTAGGTACTCATGGGACTCAGCAATCATACCCTTCGGATCCTTCATTATTTTCTGACAGGCAGTCCAAACATGGATCAAAATTTGGATTATCTTCGGCAGCTATGCCTGCCAAAGATTTTAACTCTCAAAGGAATACCAATTTTCCGCAGCCACTTCCGCAATTCACAAACATGTATGCTTCCATGCATTCATCTGGACTAGGACTGTCTTCTGGATATGCTGTTAATGGGATGTACCCGAACAACACGGCGTACAGCCAATATGGAAACACATACAGAGCTAGGTCAAATTTTGGATCTACTGCATATGGATCCAGAGCAGGTTCTTTTGATAACAAGTTTAAAGCCTCAAGTTATGGCCGAGGTTTTGACCATGTCAAAAAAAACACTGATGGCTTTGGTGAGCTGAACAAGGGACCAAGAGGTTCCAATACTTCTGATGATAAAAATGTCAAAAGTCTTGGAGCTGTCACATTATTGCTCAAGGGTCAGGACCTTCCCATCAAGAGTGATGATAATAAAGAAGTGCTTCCAGTTCCCAACAAGCAACAGTACAATGGGGAAGATTTATCTGAGAGTTATTCTGATGCAAAGTTTTATGTCATCAAGTCTTATAGCGAGGATGATATTCATAAAAGTATGAAATACAGTGTGTGGACAAGCACCCCCAATGGCAACAAGAAGCTAGATGCAGCATATCAGGAAGCCAAGGAGAAGTCTGGTGACTGTCCCATATTTTTGCTATTTTCGGTCAATACTAGTGGACAGTTTGTTGGTTTGGCTGAAATGGTGAGTCCAGTTGATTTTGACAGAACCGTAGAGTATTGGCAGCAGGACAGGTGGACTGGTTGCTTTTCTGTCAAGTGGCATATCATAAAGGATATCCCAAATAATGTGTTGAGACACATAACGCTAGAAAACAATGAATACAAACCTGTTACAAACAGTAGAGACACTCAAGAGGTCAAGTTTGAGAAGGGTATTGAAATCCTCAAAATCTTCAAGGAGTATTCAAGCAAAACATGCATTCTGGATGATTTTGGATTTTATGAGGCTCGCGAAAAGGCAACTCAGGAGAAAAAAGCCAAGGAACAATTGCTCACAAAAGACATGGTCAGCAAGTCCAATGATTTAACATCTGTTGGAACAGACTTATTGCCCAAGTCCCTTGATGAAACTTCGACGAATGAATCAGCTATTCCTGATGCAGCAGAAACAAAGGAGAATCTTACCGAAGGGAATGGACTTACTTCACCTACTGAACCACCTGCAGACTCTTCGAATAGCAGCTTAACCGGTGACAAAACCGGTGAAGAAGTCAAGCCGTAG 1707 0.4171 MAQGVFGDSGSYMYPQGYGYAPYGSYPSPSSSPSLPPDETIYGMQQYQYPSYYHPPASANGTYGANKINGHGGKTSTDVTAEHVPTSVMNKGNASTVTNGYSSNNNGANDSYQRAGFPVAEYQDPRVGTHGTQQSYPSDPSLFSDRQSKHGSKFGLSSAAMPAKDFNSQRNTNFPQPLPQFTNMYASMHSSGLGLSSGYAVNGMYPNNTAYSQYGNTYRARSNFGSTAYGSRAGSFDNKFKASSYGRGFDHVKKNTDGFGELNKGPRGSNTSDDKNVKSLGAVTLLLKGQDLPIKSDDNKEVLPVPNKQQYNGEDLSESYSDAKFYVIKSYSEDDIHKSMKYSVWTSTPNGNKKLDAAYQEAKEKSGDCPIFLLFSVNTSGQFVGLAEMVSPVDFDRTVEYWQQDRWTGCFSVKWHIIKDIPNNVLRHITLENNEYKPVTNSRDTQEVKFEKGIEILKIFKEYSSKTCILDDFGFYEAREKATQEKKAKEQLLTKDMVSKSNDLTSVGTDLLPKSLDETSTNESAIPDAAETKENLTEGNGLTSPTEPPADSSNSSLTGDKTGEEVKP 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00616 568 Gene3D ph1033 like domains 303 474 - -
Vivi4g00616 568 MobiDBLite consensus disorder prediction 536 561 - -
Vivi4g00616 568 MobiDBLite consensus disorder prediction 127 154 - -
Vivi4g00616 568 Pfam YT521-B-like domain 323 461 IPR007275 GO:0003723
Vivi4g00616 568 MobiDBLite consensus disorder prediction 504 568 - -
Vivi4g00616 568 CDD YTH 324 460 IPR007275 GO:0003723
Vivi4g00616 568 MobiDBLite consensus disorder prediction 255 276 - -
Vivi4g00616 568 ProSiteProfiles YTH domain profile. 323 460 IPR007275 GO:0003723
Vivi4g00616 568 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 5 535 IPR045168 -
Vivi4g00616 568 MobiDBLite consensus disorder prediction 504 528 - -
Vivi4g00616 568 MobiDBLite consensus disorder prediction 125 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00616 Vivi-Chr4 13603144 13607034 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00616 - K20102 gmx:100789473 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00616 4 13603144 13607034 Vivi4g00616 4 13603144 13607034 ECH