Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00605 ATGGCCGCGTCGCTCCTTTTCCTCTCCATCACCGTTTTCTCCATTCTCCAATCCGCATCAGCTTCTTCTTCCTCCAACGCTTGCATCCCCGTACCTGATTCGTTTCTCTATAATCTTCAATCTCAATGCCCAATCTACGTCCAATCCAATCCACCGCTTCAGGTGGATGGAAATTTCATAGAAGAAGTTCTATCTGGCAAAAAGAATACGGAGTCTGTCTCTATACTCTTTTATGCTTCCTGGTGCCCATTTTCACGCAGAATGCTTCCTAAATTTGAAACTCTTAGCTCCATGTTTCCTCAAATAGAGCATTTTGTTCTTGAGCAATCGTCGGCTTTGCCAAGCTTATATTCAAAATATGGAATCCATAGCTTGCCCTCAATATTATTGGTGAACCAGACCTCAAAGTTGAGATATCGTGGTCCAAACGATTTTCTCTCTCTATTGGAGTTTTATGAAAGAAACACAAGGTTTGAAGCAAGTAGTAATAATGCCATCGGTCAGCCAAGTAGCATGATGATGACAGGCGATGAGAATTCAAGTCTGAAGTCATTGATGGGTCTGTCACTTAAAGAAGCATCAAGAAGGGAACCGTACTTAGTGTTCTCTTTGATGTTTATCTGTTTGAGGATACTTCTTTTTGTATTTCCCAAGATCCTATTGCGTCTCCGAGCATTCTGGGTTTCCTGTATTCCTAATCTGAACATGCAAATATTTGGCGAGACAAGCCAAGTGATCGGACGCGTCCTTCAAGTGATCGATGTGAGGAGGATTTGGACAAAGCTAGGACTGTGCAAGACGAGGATTTTTCACGAGAGGGCAAGGAGTGCGCGAGTTTTGGCTTCATCTTTGGCTTCTGTTTCTCTGGGCGAGTCATCATCAGCTAGATAA 891 0.431 MAASLLFLSITVFSILQSASASSSSNACIPVPDSFLYNLQSQCPIYVQSNPPLQVDGNFIEEVLSGKKNTESVSILFYASWCPFSRRMLPKFETLSSMFPQIEHFVLEQSSALPSLYSKYGIHSLPSILLVNQTSKLRYRGPNDFLSLLEFYERNTRFEASSNNAIGQPSSMMMTGDENSSLKSLMGLSLKEASRREPYLVFSLMFICLRILLFVFPKILLRLRAFWVSCIPNLNMQIFGETSQVIGRVLQVIDVRRIWTKLGLCKTRIFHERARSARVLASSLASVSLGESSSAR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00605 296 SUPERFAMILY Thioredoxin-like 36 153 IPR036249 -
Vivi4g00605 296 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 7 2 296 IPR044794 -
Vivi4g00605 296 Pfam Thioredoxin 56 144 IPR013766 -
Vivi4g00605 296 Gene3D Glutaredoxin 42 169 - -
Vivi4g00605 296 ProSiteProfiles Thioredoxin domain profile. 39 157 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00605 Vivi-Chr4 12955339 12958585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00605 - - mtr:11412534 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00605 4 12955339 12958585 Vivi4g00605 4 12955339 12958585 ECH
Vivi4g00605 4 12955339 12958585 Vivi4g00605 4 12955339 12958585 PCT