Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00544 ATGAAGGAAGATATTGGAGGTGTATCAGTGAAAATGGAGGATGGAATAGTAGAAAAAAATGAAAAAGTTGGTTATATGAAAAAAGTGATTATAAAAAAGAAGAAACATTATCATAGTAGCAAAGTTAAGAAGCCAATTTCAAATAAAGCACTTCAGAAGCTATTTGTCTCATGCATGGAAACATTCAAAGGACCTGATACTGTTCCTTCAACAAAACATGTTCACAAACTATGTCACATTCTTGATAACATGAAGCCAGAAGATGTTGGACTAAGTAAAGAAATACAATTCTTCAAAGCAGAAAACAATGTCAAAGAAAATCCAAGAGTCACATACACAACCATATACAAATGTGACAATTTTTCACTATGTATATTTTTCCTACCTACAAATGGTGTGATTCCACTTCATAACCATCCAGGAATGACTGTTTTCAGTAAGCTTCTATTGGGACAAATGCACATTAAGTCTTATGATTGGGTTGATCCTGATGTCTCTCACAATTTGTTGAACCAACCATCTCAATTGAGGTTGGCAAAGTTAAAAGCTAATAAAGTATTCACATCACCATGTGACACTTCAGTGTTGTATCCAAAAAGTGGAGGAAACATCCATGAATTTACAGCCATAACTCCATGTGCTGTTCTTGATGTTATTGGACCTCCTTATTCTAAAGATGATGACAGAGATTGCTCTTACTATAAAGATCATCTTTACACTGCTTTTCCAAATGGAGAGATTGCTGAATTGAAAGAAGAAAATGAGAGCTATGCATGGTTAGAAGAAATTGAGATGCCAGAAAACTCTCAAATGGATGGAATTGAATATTTGGGTCCTCAAATTATAGAGACTTAA 855 0.3404 MKEDIGGVSVKMEDGIVEKNEKVGYMKKVIIKKKKHYHSSKVKKPISNKALQKLFVSCMETFKGPDTVPSTKHVHKLCHILDNMKPEDVGLSKEIQFFKAENNVKENPRVTYTTIYKCDNFSLCIFFLPTNGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVDPDVSHNLLNQPSQLRLAKLKANKVFTSPCDTSVLYPKSGGNIHEFTAITPCAVLDVIGPPYSKDDDRDCSYYKDHLYTAFPNGEIAELKEENESYAWLEEIEMPENSQMDGIEYLGPQIIET 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00544 284 CDD cupin_ADO 119 224 - -
Vivi4g00544 284 Gene3D Jelly Rolls 44 244 IPR014710 -
Vivi4g00544 284 Pfam PCO_ADO 80 281 IPR012864 GO:0016702
Vivi4g00544 284 SUPERFAMILY RmlC-like cupins 49 235 IPR011051 -
Vivi4g00544 284 PANTHER UNCHARACTERIZED 51 281 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00544 Vivi-Chr4 12062972 12067051 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00544 K23953 - gmx:100819405 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00544 4 12062972 12067051 Vivi4g00544 4 12062972 12067051 ECH