Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00539 ATGGGGTTTGTTGATTTTGATTCACAAGAGGGTAGTGGTAGTGGTACTTGTAAATATGGAGGACAACAAGGTTCATCATGTTCATGGAGGTTTTTGACAAGGAGGAAGAAGGTTAATTCTCATGTTGAGGATAATAACAACAACAACAGTAACAATTCTCATGGAGTGCAACTTGCTAAGGAGTTAACTATTCCTCATCTCATGGCAATTGGGGTAGGTGCAACAATTGGTGCTGGTGTGTATGTTCTAGTTGGAACAGTGGCTAGGGAACATGCTGGACCTGCTTTACCTCTTTCATTTATGGTTGCTGGATTTGCAGCCGCTCTTTCAGCTCTTTGCTATGCTGAGTTGGCTAGTCGCTTTCCTTCTGCTGGGAGTGCTTATCACTATGCTTACATATGTCTTGGTGAAGGGGTTGCTTGGTTGATCGGCTGGTCCTTAGTACTTGAATATGGGATTGGTGGAGCTGCTGTTGCTCGTAGCATAACCCCTAATTTGGCTGCAGTTATTGGCGGCGTTGACAACTTGCCAGCATTTTTATCCTATCAACGTATTCCTGGGATTGATATCGTTGTAGACCCACTTGCAGCATTTATGGTATTCATTGTTACTTGGGTCCTTTGTACTGGCATCAAAGAGAGTACAATGGTACAAAGTATAGTCACATCAGTGAATATATGCGCTTTGATGTTTGTCATAGTAGTCGGTGGTTACTTAGGATTCAAATCTGGGTGGGTTGGATATAAACTCTCAACTGGGTATTTTCCATTTGGGATAGATGGAATGATTGCTGGTTCTGCAACAGCTTTTTTTGCATACATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTGAAAAATCCTCAAAAAGATTTACCTCTAGGAATTGCTGCTTCATTGTCTCTGTGTTGTGGATTGTATATGATGGTATCCATTGTTGTTGTTGGTTTAGTACCTTACTTTGATATCAATCCTGATACCCCTATATCCTCTGCGTTTGCTGACAATGGATTGCATTGGGCAGCATACATTATAAATGTCGGGGCTATTACAGCACTGTGTTCATCATTGCTTGGTGGAATGTTGCCTCAGCCAAGAATTTTGATGGCTATGGGAAGGGATGGACTGCTGCCTCCATTTTTTTCTGACATAAATAAGCACAGCTATGTTCCTGTAAAGAGTACCGTAGTTACTGGCCTTGTTGCTGCAGCCTTGGGATTTTTCATGGATGTCTCTCAACTTGCTGGGATGGTTAGTGTAGGTACTCTTCTTGCATTCAATGCATCGGCAATATCTGTGTTGATAGTAAGGTATATCCCACCAGTTGAGGTTTCATTGCCCCCTTCTCTACAAGAACCAATTGATGCAGAGTCAATGGAATACGTTTGGAGCCATTTGGAAACATTTGAAAAAGATGCAAAAAAGAAACCCTTTATTGTTAAAGAGGATGATGTATCAGTTGATTATCCCCTTATTCCCAAAAATCTCGCAATAGACACACTTGTACATAATGCTAAAAGGAAAAAAATTATTGGCTATGTAATAGCAGTCATATGCTTAGGTGTATTTATCCTTACATTTGCAGCAGCTTCTTCATTCTTTCTCAGTTCAGTTAGATTTACATTATGTGGAGTTGGTGGCACTCTTGTTTTCTCTGGCTTTGTCTTCCTCACATGTATAGATCAAGATGATGCAAGACACAAGTTTGGAAACTCAGGAGGTTTCACATGTCCATTGGTGCCACTGCTACCTATAATTTGCATTATTATAAATTCCTATTTACTTATTAGTCTTGGGGGTGCTACTTGGGTGAGAGTTTCTGTATGGCTAGCATTGGGAGTTATTATATATGTTTTCTATGGTAGAAACCATAGTTCTCTCAAAGCTGATGATGCCAATTATACTCCTTCAAGCTTTCTTGCCTAA 1929 0.4059 MGFVDFDSQEGSGSGTCKYGGQQGSSCSWRFLTRRKKVNSHVEDNNNNNSNNSHGVQLAKELTIPHLMAIGVGATIGAGVYVLVGTVAREHAGPALPLSFMVAGFAAALSALCYAELASRFPSAGSAYHYAYICLGEGVAWLIGWSLVLEYGIGGAAVARSITPNLAAVIGGVDNLPAFLSYQRIPGIDIVVDPLAAFMVFIVTWVLCTGIKESTMVQSIVTSVNICALMFVIVVGGYLGFKSGWVGYKLSTGYFPFGIDGMIAGSATAFFAYIGFDAVASTAEEVKNPQKDLPLGIAASLSLCCGLYMMVSIVVVGLVPYFDINPDTPISSAFADNGLHWAAYIINVGAITALCSSLLGGMLPQPRILMAMGRDGLLPPFFSDINKHSYVPVKSTVVTGLVAAALGFFMDVSQLAGMVSVGTLLAFNASAISVLIVRYIPPVEVSLPPSLQEPIDAESMEYVWSHLETFEKDAKKKPFIVKEDDVSVDYPLIPKNLAIDTLVHNAKRKKIIGYVIAVICLGVFILTFAAASSFFLSSVRFTLCGVGGTLVFSGFVFLTCIDQDDARHKFGNSGGFTCPLVPLLPIICIIINSYLLISLGGATWVRVSVWLALGVIIYVFYGRNHSSLKADDANYTPSSFLA 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00539 642 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 33 627 - -
Vivi4g00539 642 MobiDBLite consensus disorder prediction 9 25 - -
Vivi4g00539 642 Pfam C-terminus of AA_permease 576 626 IPR029485 -
Vivi4g00539 642 PIRSF AA_transporter 501 637 - -
Vivi4g00539 642 PIRSF AA_transporter 39 446 - -
Vivi4g00539 642 Pfam Amino acid permease 67 443 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vivi4g00539 642 MobiDBLite consensus disorder prediction 1 25 - -
Vivi4g00539 642 Gene3D Amino acid/polyamine transporter I 58 451 - -
Vivi4g00539 642 Gene3D Amino acid/polyamine transporter I 492 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00539 Vivi-Chr4 12027087 12031856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00539 30 628 Organic Solute Cotransporters AT5G36940 61.833 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00539 K13863 - gmx:100820395 882.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00539 4 12027087 12031856 Vivi4g00539 4 12027087 12031856 ECH