Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00506 ATGAAAATGATTGCTATTTCAACTTCACTGTGTCTTGGAAATCATCATTGTTTGAAGTTGTTTCAAATGTTTATGAGAAATCAGAGAGAAACAGCTTCTGTTACATTAGGTGTAATTAGTGTCATTGTTTGGATGATTGCTGAGATACCTCAGTTAATCACTAATTACAATGAAAAATCTGCTCATGGTCTTTCTGCTACTTTCATGTTGACATGGATAATCGGAGATCTGTTTAATGTGTTTGGATGCTTACTTGAACCTGCAACTCTACCGACTCAAGTATATACTGCAGTGTTCTATACCATGATCACACTTATACTTTGTTCACAAGCAATTTACTATAGACACATATATCCCCGACTTAAGTACAAGAAACAATTCAAGATTGAAACATCAAAAGATGATGGACTAGGCAATGGTGGAGCTGAAAATGGCAATGAAGTTGAACAAAGAAGAGTCTTTGGTATGAGTTCACCAATTTCTTTTCCAGCACTTGCTCAAAAAAGCCATGTTGGAGGACAATCATACTACCAGTCAGCAAGATATCTATCAAAGAGTTATACTCAAAAATCAGAATTAGCAGAAAGAATTACATCTTCTTCTTTAGACCCTATCGAAGAGCCTTTACTCGTTTCATCTGTCTTGACGCAATCCGCTCCATCTTTGAAGATCAAGAATACTCTATGTTTGGTGACAACATTAACTTTTCTAGTTGCCTTAAATCTACTTCATTCTCAAGATACTATAAATCTTTCCGAGGTCTCAAAACCAAGAAACGAGTTTGTGATTCATGTCGGGAGAAAGCTTTTGCAGGCTAGTGGCGATCGGCTGTCAAGTTATGGCGCGGAAATGCACCATGGCATTGGAACTTACCTTGGTTGGGGAATGGCTGTTATATATATGGGGGGAAGACTTCCTCAAATTTGTTTAAATTTCAGAAGAGGTAGCTTTGAGGGAGTGAATCCTCTATTGTTTCTTTTTGCTTTAATTGGGAATACAACTTATATAGCAAGCATACTAGTTAGAAGCTTGGAATGGTCAAAAATCGGTCCGAATCTACCATGGCTTGTAGAATCTGGAGGATGTTCTCTTCTTGATTCATTTATTTTGATGCAGTTTCTATATTATCGTTATCAAAAATCGAAAGCCTTGGAAAATAAGTTCAAACATCAAGTTGTTGCATAG 1185 0.3671 MKMIAISTSLCLGNHHCLKLFQMFMRNQRETASVTLGVISVIVWMIAEIPQLITNYNEKSAHGLSATFMLTWIIGDLFNVFGCLLEPATLPTQVYTAVFYTMITLILCSQAIYYRHIYPRLKYKKQFKIETSKDDGLGNGGAENGNEVEQRRVFGMSSPISFPALAQKSHVGGQSYYQSARYLSKSYTQKSELAERITSSSLDPIEEPLLVSSVLTQSAPSLKIKNTLCLVTTLTFLVALNLLHSQDTINLSEVSKPRNEFVIHVGRKLLQASGDRLSSYGAEMHHGIGTYLGWGMAVIYMGGRLPQICLNFRRGSFEGVNPLLFLFALIGNTTYIASILVRSLEWSKIGPNLPWLVESGGCSLLDSFILMQFLYYRYQKSKALENKFKHQVVA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00506 394 Gene3D - 289 390 - -
Vivi4g00506 394 Gene3D - 33 126 - -
Vivi4g00506 394 FunFam PQ loop repeat family protein 33 124 - -
Vivi4g00506 394 SMART ctns 302 333 IPR006603 -
Vivi4g00506 394 SMART ctns 46 77 IPR006603 -
Vivi4g00506 394 FunFam Vacuolar membrane PQ loop repeat protein 288 386 - -
Vivi4g00506 394 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 10 381 - -
Vivi4g00506 394 Pfam PQ loop repeat 288 347 IPR006603 -
Vivi4g00506 394 Pfam PQ loop repeat 33 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00506 Vivi-Chr4 11347467 11352146 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00506 K23678 - gmx:100776511 405.986