Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00360 ATGTCCGTTCACCTCAAACTCTCTCATTCAAATCGTATCTATCACCCTTCCGAGCTTCTGAAAGGAAACATAATTGTAGAAACACAGTCTTCAATTTCACACTATGGGATTCGTATCACTATCAAAGGATCCGTCAATTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAGTCATTCTATGGTGTTATTAAGCCTATTCCAATTCTGAAGAGGACCGTTGAGATTAAGCCTTCCGGAAAGATCGGTTCGGGCACGACAGAGATACCATTTTCATTGAACCTTAGACAGGAAGAGAATTTAGAAAAGTTTTATGAGACTTTCCATGGGACAGATATTAGTATCCAGTATTTAGCGACTGTAGATATTTCTCGCGGATACTTGTATAAATCTTTATCAGCAACGACGGAGTTCATTATTGAAAGTGATAAAGGTGATCTTCTACAAAGACCAATATCTCCAGAGACGGTCATCTTTTATATTACACAAGACACTCAAAGACATCCTCTTCTTCCTGAATTAAAGTCCGGTGGATTTCGGGTGACAGGAAAAATCTGTACTCAGTGTTCTTTGTCCAGTCCTATTAATGGCGAACTAACTGTCGAAGCATCAGCAGTTCCAATTCATTCGATCGACATCCAGTTATTTCGCGTTGAATCTATTCTTATTGGGGAGAAAATTGTGAATGAAACCTCACTGATTCAAACAACTCAGGCAAGTGATGCTGGATTTATAGCAGATGGTAACGTGTGTCGCAATTTGACAATGCCTATCTATGTAATACTTCCTCGACTTTTGACCTGTCCAACAATCTTCGCTGGTCCCTTTTCAATTGAGTTCAAAGTTGCAATTGTTATAAGCTTTCAATCAGAGCTATCTAAATTGCAAAAGAAGTCTGACTCAAGAACTCCAAGACTCTGGCTTGCAATGGAAACATTACCGCTCGAATTGGTTCGCACAATGTAA 966 0.3986 MSVHLKLSHSNRIYHPSELLKGNIIVETQSSISHYGIRITIKGSVNLQVRGGSAGVVESFYGVIKPIPILKRTVEIKPSGKIGSGTTEIPFSLNLRQEENLEKFYETFHGTDISIQYLATVDISRGYLYKSLSATTEFIIESDKGDLLQRPISPETVIFYITQDTQRHPLLPELKSGGFRVTGKICTQCSLSSPINGELTVEASAVPIHSIDIQLFRVESILIGEKIVNETSLIQTTQASDAGFIADGNVCRNLTMPIYVILPRLLTCPTIFAGPFSIEFKVAIVISFQSELSKLQKKSDSRTPRLWLAMETLPLELVRTM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00360 321 Pfam Vacuolar protein sorting-associated protein 26 9 286 IPR028934 GO:0006886
Vivi4g00360 321 Gene3D - 185 299 IPR014752 -
Vivi4g00360 321 FunFam Vacuolar protein sorting-associated protein 26 182 295 - -
Vivi4g00360 321 SUPERFAMILY E set domains 3 170 IPR014756 -
Vivi4g00360 321 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 9 297 IPR028934 GO:0006886
Vivi4g00360 321 FunFam Down syndrome critical region protein 3 1 143 - -
Vivi4g00360 321 Gene3D - 2 142 IPR014752 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00360 Vivi-Chr4 8197200 8201084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00360 K25730 - gmx:100820593 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00360 4 8197200 8201084 Vivi4g00360 4 8197200 8201084 ECH