Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00355 ATGAGAAGAGCTTACTCTGTTTTACTTCACAGAAACCTCGCCGCCGCTCGCCACGGCTCCGCCACCTCCATCGCCGTCCCTAACCGTTTTCTCCAGGCCACTCTCTACGGCACCACCGCCGGTTCATCTCCGTCAAGCCGGCGTTGGTTCTCTTCCGTCCTCGCCGCCGTCGCCGGAACGACTCTCGGTGTCGGCGGTCTTATCGCGGCTAACTCTGCCTCTCAGGAAGTGCTTGCTAAGGAACGTCCTCCGTCAGATGCTATTCCTAGCGACGTCGTTCTTTATCAGTATGAGGCTTGTCCTTTCTGCAACAAAGTGAAAGCATTTTTGGACTACTATGATATACCATACAAGGTTGTGGAGGTCAACCCTCTTAGCAAGAAAGAAATCAAGTGGTCCGAGTATCAGAAGGTGCCAATTATAATGGTAGATGGCGAGCAGCTAAATGATTCGTCAGCTATAATTGACAAGCTTGGAGAGAAGATTCTATCTAAGAAAAAGGCAGATTCAACCTCTGAGGATGATGAAGAGACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTCCACGTTCTATCGCCTAATATATATAGAAATACCTCTGAAGCTCTAGAATCCTTTGACTATATCACGAGCAATGGCAATTTTAGCTTCATGGAAAAAATTTCGGTGAAGTACGCTGGTGCTGCAGCTATGTATTTTGTGTCGAAGAAGCTAAAGAAGAAATATAACATTACTGATGAGCGTGCTGCTCTTTATGAGTCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGCGAGTTCCTTGGAGGGTCTAAGCCTAACTTTGCCGATTTGGCTGTCTTTGGGGTTCTAAGGCCCATACGCTATTTGAGGTCTGGTAAGGATATGGTGGAGCACACACGTATTGGTGAGTGGTACACAAGAATGGAGATCGTTGTGGGAGAGCCTTCCAGGATTAAAGCCTAA 969 0.4757 MRRAYSVLLHRNLAAARHGSATSIAVPNRFLQATLYGTTAGSSPSSRRWFSSVLAAVAGTTLGVGGLIAANSASQEVLAKERPPSDAIPSDVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPIIMVDGEQLNDSSAIIDKLGEKILSKKKADSTSEDDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFDYITSNGNFSFMEKISVKYAGAAAMYFVSKKLKKKYNITDERAALYESAETWVDALNGREFLGGSKPNFADLAVFGVLRPIRYLRSGKDMVEHTRIGEWYTRMEIVVGEPSRIKA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00355 322 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 8 321 - -
Vivi4g00355 322 ProSiteProfiles Glutaredoxin domain profile. 80 174 - -
Vivi4g00355 322 Gene3D - 170 320 - -
Vivi4g00355 322 Pfam Glutathione S-transferase, N-terminal domain 94 160 IPR004045 -
Vivi4g00355 322 SFLD Glutathione Transferase (cytosolic) 42 321 IPR040079 -
Vivi4g00355 322 CDD GST_C_mPGES2 173 316 IPR034335 -
Vivi4g00355 322 SUPERFAMILY GST C-terminal domain-like 164 314 IPR036282 -
Vivi4g00355 322 Gene3D Glutaredoxin 84 165 - -
Vivi4g00355 322 ProSitePatterns Glutaredoxin active site. 94 110 IPR011767 -
Vivi4g00355 322 SUPERFAMILY Thioredoxin-like 91 186 IPR036249 -
Vivi4g00355 322 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 90 166 IPR004045 -
Vivi4g00355 322 SFLD Prostaglandin E synthase like.1 42 321 IPR034334 GO:0050220
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00355 Vivi-Chr4 7904519 7909745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00355 K05309 - gmx:100811576 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00355 4 7904519 7909745 Vivi4g00355 4 7904519 7909745 ECH