Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00289 ATGGCACACAACACATCATCTGATTCTGATAATGAAATTTCTGCAACAAGAACTAATCTCTTCCAACATGAAAAACCTGTACATGAAATTCTTGGAGGAGGAAAAGTGGCAGATATATTATTATGGAGGAACAGAAATGAATCTGCTGCACTTTTCCTTGGGATGACAGTTATATGGTTTCTATTCGAGATCCTCGAGTACAATTTTGTGACGGTCATTTCTCGTTTTTCCATCACCATAATGCTTGGACTATTCATTTGGTTCAAAGTTGCTGATATATTAAAATGGAAAGAACCTCAGATACCAGAAATTATTTTGCAAGAGTCTTTCCTAGAGAATCTTGCTTTCAGCCTTGACAAACTATTCAACCAGTTATTACCAATGATTTTCCATATTTCATGTGGAAGAGACCTACCACTCTTTCTTATGATCATTGTTTTCCTCTATATAGTCTCGGTGATCGGAAGCTACTTCAGTTTTATTAATCTTTTATACATTGGCTTTGTCTTCTTGCAAACATTGCCGCTTGTGTTTGAACGATACGACGAAGAAATTAACATTCTGTTTGAAGATATCATGTTGGTACTCAAGAAAATTTATAGGAAGTTTGAAAAGAATTATCTTAAGAAAATTCCTAGAGGACCAATGAAGGACAAAAAAGTTCAATGA 669 0.3468 MAHNTSSDSDNEISATRTNLFQHEKPVHEILGGGKVADILLWRNRNESAALFLGMTVIWFLFEILEYNFVTVISRFSITIMLGLFIWFKVADILKWKEPQIPEIILQESFLENLAFSLDKLFNQLLPMIFHISCGRDLPLFLMIIVFLYIVSVIGSYFSFINLLYIGFVFLQTLPLVFERYDEEINILFEDIMLVLKKIYRKFEKNYLKKIPRGPMKDKKVQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00289 222 ProSiteProfiles Reticulon domain profile. 36 222 IPR003388 -
Vivi4g00289 222 PANTHER RETICULON 12 212 - -
Vivi4g00289 222 Pfam Reticulon 36 190 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00289 Vivi-Chr4 6570344 6571489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00289 - - gmx:100809028 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00289 4 6570344 6571489 Vivi4g00289 4 6570344 6571489 ECH