Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00276 ATGAAAACAGCACAGATTGCTATTTGCACCTTCCTTTTGCTGCTTTTGGTTAATGTTGAAGTGTCAATGGCAGTAACATGCAGTCCAGTGCAACTTAGCTCATGTGTGAGTGCAATCACTTCTTCAACTCCTCCATCTAAACTATGCTGCTCCAAGATAAAGGAACAAAGACCTTGCCTTTGCCAATACCTCAAGAATCCTAATCTTAGGAAGTTTGTTAACACTCCTAATGCAAGGAAAGTTGCTAACACTTGTGGAACTCCCTTCCCAAGGTGCTAA 279 0.4158 MKTAQIAICTFLLLLLVNVEVSMAVTCSPVQLSSCVSAITSSTPPSKLCCSKIKEQRPCLCQYLKNPNLRKFVNTPNARKVANTCGTPFPRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00276 92 CDD nsLTP2 27 92 IPR033872 GO:0006869
Vivi4g00276 92 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 92 IPR036312 -
Vivi4g00276 92 SMART aai_6 27 92 IPR016140 -
Vivi4g00276 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 92 IPR033872 GO:0006869
Vivi4g00276 92 Gene3D - 25 92 IPR036312 -
Vivi4g00276 92 Pfam Probable lipid transfer 25 87 IPR016140 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00276 13 92 Acyl Lipid Metabolism Gene Families AT3G18280 63.750 1.21e-34 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00276 - - tcc:108661085 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00276 4 6163280 6164044 Vivi4g00276 4 6163280 6164044 ECH