Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g00188 ATGGTGCGTCGAAAACGAGAAAGTCTCCCACCGGCGATTTCAAGCGATGATTATCCTTCAAAGCGTAGAAGACATTCAATGTTCGAAATTTCGTCCTCTCATCACGGAGTATCTTCTTCTAGGAAATGGGTTTTCTCCTCCGAGAATTCTTCTGATTGCACGGATACAATTGTCGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATATGGATTTGTATTCCAATATCCCACGACGTTTCTTGGAATGGGGAAGACGCAAGAGGCTTATACTTGACGAGATTAACAGCTATAATGCAAGTATACTCTGTTTCCAGGAGGTTGATCATTTTGATGATTTAGATGATCTTTTTCAGAACAATGGCTTTAAAAGTGCTTACAAGGCTCGCACCGGAGAAGCCAACGATGGATGTGCTATATTTTGGAAAGACAAATTATTCAGTCTTTTGCATCAAGAAGATATAGAGTTCCAAAAGTTTGGTCTGCGTAACAATGTTGCTCAGCTTTGTGTTTTGGAGGTAAACAATGATAATCCAGAATCTGACATATGTAAACTAACAGCAGAGGAACAATCCACCAGAAACAAAAAATTTGTAATAGGAAATATACATGTGCTGTTCAACCCTAACCGTGGTGATATCAAACTTGGTCAGGTCAGACTTTTAATTGATAAAGCGTACAAGTTATCACAAGAATGGGGAAACATCCCTGTTATTTTAGCTGGGGATTTAAACAGCGTGCCACAGAGTGCAATATATAAATTCCTGTCTTCATCAAAGTTAGATGTCCAATTACATGATCGCAGAAATATGTCAGGACAGCTTGAAATCCGGCCCAATCACAGATACTTCAGATCAAAGATTGGCAATGATGCTAGCATTTCAATGTCTGTTTCAAGGCAAATGCTATACAAATGGAGTGCAGAAGAACTAATCCTTGCAACTGGCGCAGAAGGAGTTACTCGACTTCAGCACCAGCTCAAGCTCCGCAGTGCTTATAGCGGCATTCCTGGAAAGCTTAGAACAAGAGATGATATTGGAGAGCCCTTGGCAACATCATACCACTCTAAGTTCATGGGAACTGTTGATTATATCTGGCATTCTGAGGAACTTATCCCGGTCAGAGTTCTTGAAACCTTGCCCATTGATATTCTTAGAAGAACTAGAGGACTTCCTAACGAGAATTGGGGAAGTGACCACCTCGCCGTTGTATGTGAATTTGCCTTTGCGAAAAATGCTGAAAGTTCTGATTCTTGTGATCTTCCCTAG 1278 0.4038 MVRRKRESLPPAISSDDYPSKRRRHSMFEISSSHHGVSSSRKWVFSSENSSDCTDTIVVVSYNILGVENASNHMDLYSNIPRRFLEWGRRKRLILDEINSYNASILCFQEVDHFDDLDDLFQNNGFKSAYKARTGEANDGCAIFWKDKLFSLLHQEDIEFQKFGLRNNVAQLCVLEVNNDNPESDICKLTAEEQSTRNKKFVIGNIHVLFNPNRGDIKLGQVRLLIDKAYKLSQEWGNIPVILAGDLNSVPQSAIYKFLSSSKLDVQLHDRRNMSGQLEIRPNHRYFRSKIGNDASISMSVSRQMLYKWSAEELILATGAEGVTRLQHQLKLRSAYSGIPGKLRTRDDIGEPLATSYHSKFMGTVDYIWHSEELIPVRVLETLPIDILRRTRGLPNENWGSDHLAVVCEFAFAKNAESSDSCDLP 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g00188 425 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 412 - -
Vivi4g00188 425 Gene3D Endonuclease/exonuclease/phosphatase 31 422 IPR036691 -
Vivi4g00188 425 SUPERFAMILY DNase I-like 56 411 IPR036691 -
Vivi4g00188 425 MobiDBLite consensus disorder prediction 1 22 - -
Vivi4g00188 425 Pfam Endonuclease/Exonuclease/phosphatase family 60 403 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g00188 Vivi-Chr4 3446623 3452383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g00188 87 261 EF-hand Containing Proteins AT5G54130 26.087 1.23e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g00188 - - gmx:100777474 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g00188 4 3446623 3452383 Vivi4g00188 4 3446623 3452383 ECH