Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g07460 ATGTCTCTTTCACATAGTTTCATCTTTCTCTTCTCCATTATCACACTCATAATTTCCAATGGAGTTTCCTCACAACAATCCAACATCATATTACCCTCCCAACAACAACGAAACATCGAAAAACTAACACATATCCACTTCTACTACCACGACATCAGAACCAAAAAAAACCCTACAATGATACAAATCATCGACACGCCAAAAAACGTGGCTAATGGATTTGGCTCAGTTTTTATGATGGATGATGCAATGACGGAAGGACCGGAGTTAAGTTCAAAGAAGATTGGAAGAGCTCAAGGGCTAATAGGTCTTTCATCACTTCGTGATATTGCTGAGTTTATGTTGATAAATTTAGTGTTTGATGAAGGGAGTTATGCAGGAAGTACTCTAAGTATGTTAGGGAGGAACCCTATTTCAAAGCAAAATAGAGAAACAAGTATTGTTGGTGGAACTGGTGTTTTTAGGTTTGCTAGAGGCTTTGCTATTGCGAATAGTGTTAACTCCATTTCTACACCTCAACATTATATTGTTGAGTATAACATTACTGTTTCTCATCCCTAG 561 0.3743 MSLSHSFIFLFSIITLIISNGVSSQQSNIILPSQQQRNIEKLTHIHFYYHDIRTKKNPTMIQIIDTPKNVANGFGSVFMMDDAMTEGPELSSKKIGRAQGLIGLSSLRDIAEFMLINLVFDEGSYAGSTLSMLGRNPISKQNRETSIVGGTGVFRFARGFAIANSVNSISTPQHYIVEYNITVSHP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g07460 186 PANTHER NUCLEOPORIN-RELATED 36 181 IPR004265 -
Vivi3g07460 186 Pfam Dirigent-like protein 43 183 IPR004265 -
Vivi3g07460 186 Gene3D - 28 184 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g07460 Vivi-Chr3 206460650 206461210 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g07460 - - gsj:114373775 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g07460 3 206460650 206461210 Vivi3g07460 3 206460650 206461210 ECH