Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05960 ATGGGTAGCACCAGTGAAGAGAATATTATGGATGGTGAGATTGTTCCTTCTTCACTAGCTGTTGTTGTGCCTATTCTTAGAGCTGCCAATAGTATTGAATTGGAGAATCCTAGAGTTGCCTATCTTTGTCGCTGGTATGCAGTTGAGAAGGCTCATACAATTGATCCAACATCAAGTGGCCATGGCGTCCGACAATTCAAGACTAATCTGCTGTGCAAGCTCGAAAGGGAAGAGGAGATAACACAGAAACATACTAACAGAACTGATCCCCGAGAGCTACTGAATTACTACCAAACTTTCTACGAGACTAGAATCAGGGATGGTGAATTTACTAAAGAACCGGAGGGGATGGTTACGAATGTTCAGATTGCCACTGTCTTGTATGAAGTACTGAAGACTATGCTAGCTCATCGAACTATCGATGAGAAGACAAAAGGATATGCTGCGGATGTTGAGAATAAGAAGGTACAGTATGAGCATTCTATATGCAGCTCCTCTTGTTCAGATGATAAACTTAGAGGTCCAGGAAGCTACCAAAGAGATGATGTGGTGCCAGATGAGAGTCCTCTTGTGGCATGCATTAGTGAACCATCTGAGAAAAAGATTGATAATGCTCTGAAGGAATTATCTAAATCTCAAGGGTGA 645 0.4217 MGSTSEENIMDGEIVPSSLAVVVPILRAANSIELENPRVAYLCRWYAVEKAHTIDPTSSGHGVRQFKTNLLCKLEREEEITQKHTNRTDPRELLNYYQTFYETRIRDGEFTKEPEGMVTNVQIATVLYEVLKTMLAHRTIDEKTKGYAADVENKKVQYEHSICSSSCSDDKLRGPGSYQRDDVVPDESPLVACISEPSEKKIDNALKELSKSQG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05960 214 Gene3D - 7 159 IPR023175 -
Vivi3g05960 214 MobiDBLite consensus disorder prediction 165 185 - -
Vivi3g05960 214 Pfam Vta1 like 22 136 IPR039431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05960 Vivi-Chr3 144049716 144050856 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05960 6 160 Glycosyltransferase AT1G06490 61.935 9.65e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05960 K11000 - vvo:131656758 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05960 3 144049716 144050856 Vivi3g05960 3 144049716 144050856 ECH