Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05892 ATGCTTCTTTTTCCATTATACTCATCAATGAGGGCGATTGAGAGTCCTTCAACCTTAGATGATCAGCAGTGGCTAACATATTGGGTTTTATACTCCTTCATAACCCTCTTTGAGCTTTCATTTTACAAGATCTTACCATGGTTTCCCATTTGGCCATACATGAAGCTTGTGTTTTGTATGTGGCTGGTATTACCAATGTTCAATGGAGCTTCATTTCTATATGAGAATTATGTGAGACAATATGTAAAAAATATAGGAAATTATGGAGGTTTCAATAAGTATCAAGAGGAACAAAAGAAAGTCCTTCAAATGATTAGCTTGGATGCAAGAAAAGCTGTTGAACGTTACATAGATAGATTTGGACCTGATGCATTTGAGAGAGTAATCAAAGTGGCTGAGAAAGAAGCAAGGAAGCACTAA 420 0.3619 MLLFPLYSSMRAIESPSTLDDQQWLTYWVLYSFITLFELSFYKILPWFPIWPYMKLVFCMWLVLPMFNGASFLYENYVRQYVKNIGNYGGFNKYQEEQKKVLQMISLDARKAVERYIDRFGPDAFERVIKVAEKEARKH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05892 139 PANTHER HVA22-LIKE PROTEINS 2 116 IPR004345 -
Vivi3g05892 139 Pfam TB2/DP1, HVA22 family 5 81 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05892 Vivi-Chr3 140602676 140605283 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05892 K17279 - gmx:100819566 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05892 3 140602676 140605283 Vivi3g05892 3 140602676 140605283 ECH
Vivi3g05892 3 140602676 140605283 Vivi7g02803 7 92286275 92292892 PCT