Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05785 ATGAAGAACACAAAACCTCAAAACCAACCAACCCCTTCAAGATTTTCAACCCATTTACAAATGGTTGAACTCAAACACAAGATCTTAACCTCCCTCTCCAAACTCTCCGACAGAGACACCCACCAGATAGCCGTCGAAGATCTCGAAAAGACCATCCTAACCCTCTCCCCCGACGCCATTCCCATGATCCTTAACTGTCTATACGACGCCGTTTCAGACCCCAAACCCTCCATAAAAAACGAATCCCTCCGTTTACTGTCATTCGTTTGCTCCTCCCACCAACACTCCGTTACGCCTCACCTAACCAAAATCATCTCCCATATAGTGCGGCGGCTTAAGGATACTGATTCGGCTTCGCGCGACGCGTGCCGAGACTCGATTGGAGGGATTGCGGCTTTGTATTTAAGGGGAGAGAACAATGGGAGTGGTGGCACTGGTTCTCTGGTTGGGTTGTTTGTGAAGCCGTTATTTGAGGCAATGGGGGAGCAGAATAAAGGTGTTCAGGCTGGGGCGGCGGTTTGTATGGCCAAGATAGTTGAGTCTACTGCTGCTGTGAATGAAGGGGATGTGGGGGTTGTGCCGGTGGGGGCGTTTCAGAAGATGTGCCCTAGGATTTGCAAGCTGATTAATAACCCTAATTTTTTGGCTAAGGCAGCGATTTTGCCTGTGGTTGCTGCATTGTCTCAGGCTGGGGCAATTGCACCACAAAGTTTGGATAACTTGCTATCTAGCATTCATGATTGCCTCTCCAGTAGTGATTGGGCAACACGCAAAGCAGCAGCAGAAGCATTAAGTTCTTTGGCTTTGCATTCAAGCAGTTTGATTACTGATAAAACGGGGCCTACAGTTGCATTGCTCGAGGCTTGTCGGTGTGACAAGATAAGACCTGTGAGGGATAGCATGACAGAGGCATTGCAGTTGTGGACAAAAATTGCAGGGAAAGAAGATGGATCTTCTCATGATTCAAAGCCTTTGTCGTCAGATGCTGGGAGTCCTGAATCAGCTGTTTTGTCAGAAACCAGTGACCTGAAAAAGGTGAATCCTGATGAGAGGAAGACTGATCCATCAGTAAAAGATATACCAACCAGTTCTTCTAACACGGATTTGAATTCTAAAGCCAAAGCGGCTAGTGTCTCTGAGAAGGCAGTTGTAATTTTAAAAAAGAAACCACCTGTCTTAACTGACAAAGTACTAAACCCAGAATTTTTCCAAAACCTTGAGAAAAGGAGCTCCGATGATTTACCAGTGGAAGTGGTTGTTCCTCGCAGATGCCTCAATTCTTCATCCTCAAACAACGAGGAAGAGTCAGAGGCAAGTGCTAAAGATTTAAACGAAAGAACGAATCCCGTTGGAAATGTCCCTAATGAAGGCTTTCATCGATCTCTCAATAATAAATATCTTGGTTTAGAAAGAGGAAATGATGGGAATTCAAGACAAAGAAATTATGACGACTTTGCCCATGACAGATACTCTGAGAGGAGAATGAATGTGAAAGAACTAAGGACAAAACCAAACGATACAAATGACAGGACTGAAAATGATCAGAGAGAGGGTTCCTCTAATATTGCAGGTTTTTCTAGATCTGATGGTCAATCAGAAGTACCCTTCTCCAATAATAGAGGAAACTTGTTGGCCATCCAGAGACAGTTAACACAGCTTGAAAGACAACAGGTTCATCTGATGAACATGCTGCAGGATTTCATGGGTGGATCTCATGATAGCATGGTGACTCTAGAGAACAGAGTACGAGGTCTTGAGAGAATTGTTGAAGATATGTTACAAGATTTATCTATATCATCAGGCCGGAGATTCGAGGGATCATCCACTAGGCCTTCTAGCAAATATAATGGTTTTAATGATTACTCCAATACCAAGTATGGAAGAGGTGGTGATGGACGCATCCCATATAATGAAAGATATACCCAAACTGACGGGAATGCTTTGGGTATGAGGGGAAGAGGGCCATCTTGGAGATCTGACATGCCTGAGGGTTGGGATTTTCCTGGGTATGGTGCTTCTAGGAATGGCCAGATTTCCTCAAGGAGGGCTTTTGGTGGTAGTTCTGTTGATGGAAGATCACCAAACTCATTGCATGAGAGTGATCAGGGGGGCAGCAGGAGAGCTTGGGATAAAGCAGCAATGCCCATCCGGCTTGGTGAGGGGCCCTCTGCAAGAAGTGTTTGGCAAGCTTCTAAAGATGAAGCTACCTTGGAAGCAATTCGGGTTGCTGGTGAAGACAATGGACCATCTAGGGCAACAAGAGTAGCAATCCCTGAAATGACTGCAGAAGCTCTGGCTGATGACAGTGTTGGACAAGAGAGGGATGCAATCTGGACTTCCTGGAGTAATGCAAATGACGCCCTTCAAGCAGGTGACATAGATTCGGCCTTTGCAGAGGTGTTGACAACAGGAGATGATCGTTTGCTTGTAAAACTAATGGATAGAACAGGTCCTGTAATTAATGAACTTTCAAATGACATTGCATGTGAGATCTTGTATGCCATCGGACAATTCTTACTGGAGCAGGACCTGTTTAACATCTGTTTGTCTTGGATTCAACAGTTGGTGGAGGTATTATTCGAAAACGGCCCAGATACTTTTGGTGTTCCCATGGAAGTGAAGGAAGAGCTTTTGCGGAATTTACACGATGCTTCAACAGATACCGCTGAGGGCTGGGAAGGTGTTCCTCCAGATCAACTTTTATTGCAGTTGGCATCAGGCTGGGAAATTGATCTGCAACATCCTGACAAATAA 2754 0.4513 MKNTKPQNQPTPSRFSTHLQMVELKHKILTSLSKLSDRDTHQIAVEDLEKTILTLSPDAIPMILNCLYDAVSDPKPSIKNESLRLLSFVCSSHQHSVTPHLTKIISHIVRRLKDTDSASRDACRDSIGGIAALYLRGENNGSGGTGSLVGLFVKPLFEAMGEQNKGVQAGAAVCMAKIVESTAAVNEGDVGVVPVGAFQKMCPRICKLINNPNFLAKAAILPVVAALSQAGAIAPQSLDNLLSSIHDCLSSSDWATRKAAAEALSSLALHSSSLITDKTGPTVALLEACRCDKIRPVRDSMTEALQLWTKIAGKEDGSSHDSKPLSSDAGSPESAVLSETSDLKKVNPDERKTDPSVKDIPTSSSNTDLNSKAKAASVSEKAVVILKKKPPVLTDKVLNPEFFQNLEKRSSDDLPVEVVVPRRCLNSSSSNNEEESEASAKDLNERTNPVGNVPNEGFHRSLNNKYLGLERGNDGNSRQRNYDDFAHDRYSERRMNVKELRTKPNDTNDRTENDQREGSSNIAGFSRSDGQSEVPFSNNRGNLLAIQRQLTQLERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRRFEGSSTRPSSKYNGFNDYSNTKYGRGGDGRIPYNERYTQTDGNALGMRGRGPSWRSDMPEGWDFPGYGASRNGQISSRRAFGGSSVDGRSPNSLHESDQGGSRRAWDKAAMPIRLGEGPSARSVWQASKDEATLEAIRVAGEDNGPSRATRVAIPEMTAEALADDSVGQERDAIWTSWSNANDALQAGDIDSAFAEVLTTGDDRLLVKLMDRTGPVINELSNDIACEILYAIGQFLLEQDLFNICLSWIQQLVEVLFENGPDTFGVPMEVKEELLRNLHDASTDTAEGWEGVPPDQLLLQLASGWEIDLQHPDK 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05785 917 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 15 885 IPR033337 GO:0005874|GO:0008017
Vivi3g05785 917 MobiDBLite consensus disorder prediction 425 536 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 314 374 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 343 357 - -
Vivi3g05785 917 SUPERFAMILY ARM repeat 28 854 IPR016024 -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 668 708 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 323 341 - -
Vivi3g05785 917 Gene3D - 23 137 IPR011989 -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 643 662 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 476 516 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 602 621 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 517 536 - -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 358 374 - -
Vivi3g05785 917 Coils Coil 575 595 - -
Vivi3g05785 917 Gene3D - 142 279 IPR011989 -
Vivi3g05785 917 MobiDBLite consensus disorder prediction 673 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05785 Vivi-Chr3 134287237 134294220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05785 - - gmx:100804845 1395.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05785 3 134287237 134294220 Vivi3g05785 3 134287237 134294220 ECH