Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05664 ATGGCGTCGTGGTGTGCTGCTAAGACCTTCAACATTTCATCCGTCAACGCCGCCGTTAACAACCGCCGAGCTTCATGGGCCGCCGGGATCGGCGGTCTCTCAGTCGCCGGCACCGCTATGTGGCGTTCCTCTTCGTCTAAGCGCTCTTTACCCTTCCTTTGCTCAAGCCTTTCTACTGATGCTCGGATCAAGGAAGCTGTTCACACTGATAAGGCCCCAGCGGCATTGGGACCATATTCTCAAGCAATCAAGGCCAACAACCTTCTATTTGTGTCGGGTGTCCTTGGTCTTGTTCCTGAGACCGGGAAGTTCGCTTCAGATGATGTTGAAGTTCAGACTGAGCAGATTCTAAAGAATATGGGGGAGATCTTAACATCCGGGGGTGCCAGCTACGCATCAGTTGTTAAGACAACAATTTTGTTGGCTGACTTGAAGGACTTCAAGAAAGTTAATGACATCTATGCTAAATGTGAGTACGCTTCTCTTGCGCGAGAATCATTTTATTTTTATGTGAATGCGCTTCTCACTTCTGAATTGTCATCCAATGTTTCAATAATCATTTACATGTGGTTTGAATGGTTTCAGACTTTCCTTCACCTGCCCCGGCTCGCGCGACGTATCAGGTAG 627 0.4833 MASWCAAKTFNISSVNAAVNNRRASWAAGIGGLSVAGTAMWRSSSSKRSLPFLCSSLSTDARIKEAVHTDKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFASDDVEVQTEQILKNMGEILTSGGASYASVVKTTILLADLKDFKKVNDIYAKCEYASLARESFYFYVNALLTSELSSNVSIIIYMWFEWFQTFLHLPRLARRIR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05664 208 CDD YjgF_YER057c_UK114_family 79 156 - -
Vivi3g05664 208 Gene3D - 59 189 IPR035959 -
Vivi3g05664 208 NCBIfam Rid family detoxifying hydrolase 64 156 IPR006056 -
Vivi3g05664 208 SUPERFAMILY YjgF-like 64 156 IPR035959 -
Vivi3g05664 208 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 65 158 IPR006175 -
Vivi3g05664 208 Pfam Endoribonuclease L-PSP 70 157 IPR006175 -
Vivi3g05664 208 FunFam L-PSP family endoribonuclease 63 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05664 Vivi-Chr3 125726501 125729041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05664 K09022 - gmx:100785544 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05664 3 125726501 125729041 Vivi3g05664 3 125726501 125729041 ECH