Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05649 ATGGTTAAGGGTTTGCACAGCCAAAACCTCCCCGCCGATGTAGCACACGTCGTCGATCAGCTAGAGCGCCACTGCTTGGCTCCTGATGGATCTCTCATCTCCAAGCCTCTCTACAACGATCTCCAACTCGCTAGAGAGGAAATGTGCAGGGAACGACTTCGATATCTCGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCATCAAGCCATTTCTGTGTCTAGCATCGGTGGAATGAGAGATACTGGAGGTCTTTATCCGCAGTTCGGGTTGAGGAACTCTCCTCTGGTTTATCAGACATTAGAACATCAAATGATTGTCGCTGAAGCAGCTCAGCGATTGAGACTACCTCTTATTTCCAAAGATGGAGAAGTTCACGATGAAGAAATTGAAAAGCTAAGTGTAGTGTCTCGAAACTCCCTTGACAGTAATAGCACCAGTGCTGTGAACAACTCGAGCTTGAGTTCTTCTAATTATGCCACTCCAAACAGCTCTGTTAGTGGGGCTAATTATTCTCTTGCTTCTATGGATCAAGTAGACCCTGTAGTTGGTGGTGTTCCCAGTCGTTTTCTTGGAATTACACCGGCTTATTTGTGGCAGACTCAGCATCTGAAAACACCATTATCTGTGGATATGACAGAATATCGTATGTCTCTCTCACGGGAGGTTGATGCTCGCTTAAAAATGAAATGTGATAAGTTATCAGATGCATTTGTATTGGAAGACAATGATTCATCATCATCTGGAAGTCAAAGTTCAACTTCACGGCTTCCAGAAAGAGTGAAGTTGTTGATTGAGGAGATTGAAAGAGAAGAAGCAGCTCTGAGGGATGACCTTTATTCTGCTGATAGAAAATTTGCTGAATATTATAGTGTACTGGAACAGATACTTGGGGTGCTCTTCAAACTTGTCAAAGATTTGAAGTTGGACCGTCAACATAAATATGATGAGATGCAGAAAACATGGCTTTGTAAAAGATGCCAAACCATGAGTGCAAAATTGAGTGTTCTAGAAAATGTTCTTCTCCTCGGAACTTACACTAAGGAGTCTATAGCCGCCCTTCATAAGATAAGGAAGTATCTCGTCGAGGCTACTGAAGAGGCTTCTATTGCATATAATAAAGCGGTTACTCGACTGCGTGAGTACCAGGGTGTGGATCCTCACTTTGACGACATAGCGAGGCAGTACCAAGACATTGTAAAGAAATTGGAAAACATGCAATGGACAATCGACCAAGTTGAGATGGATCTGAAACGCATGTCCGATAGTTCTACCTCATAG 1296 0.4313 MVKGLHSQNLPADVAHVVDQLERHCLAPDGSLISKPLYNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYHQAISVSSIGGMRDTGGLYPQFGLRNSPLVYQTLEHQMIVAEAAQRLRLPLISKDGEVHDEEIEKLSVVSRNSLDSNSTSAVNNSSLSSSNYATPNSSVSGANYSLASMDQVDPVVGGVPSRFLGITPAYLWQTQHLKTPLSVDMTEYRMSLSREVDARLKMKCDKLSDAFVLEDNDSSSSGSQSSTSRLPERVKLLIEEIEREEAALRDDLYSADRKFAEYYSVLEQILGVLFKLVKDLKLDRQHKYDEMQKTWLCKRCQTMSAKLSVLENVLLLGTYTKESIAALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDDIARQYQDIVKKLENMQWTIDQVEMDLKRMSDSSTS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05649 431 Coils Coil 270 290 - -
Vivi3g05649 431 Pfam HAUS augmin-like complex subunit 4 183 420 IPR029327 GO:0051225|GO:0070652
Vivi3g05649 431 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 3 423 IPR029327 GO:0051225|GO:0070652
Vivi3g05649 431 MobiDBLite consensus disorder prediction 146 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05649 Vivi-Chr3 124191626 124196506 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05649 K16587 - gmx:100786070 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05649 3 124191626 124196506 Vivi3g05649 3 124191626 124196506 ECH