Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05632 ATGGTTCAGGTCGCCAAACGGAAGAAAGGAAGGCCGTCGAAGGCGGATCTAGCTCGCCGCGCCGCCGAAGCTCAAGCCTCCGCAACGGAATCCGATTCCCGCCGTAGTCTCCGCCGCAAGAACGTGAGGTACAACATAATCGACTACGACGGCGATTACATCGACGACGAGGAAGATGAGAGGAGAAGAGAGAAGAAGAAGCTCAAATTGATGACGAAGCTGCACCAAGGGGAACAAGAGCAAGAATTGGAAGATCACGCACCAATGGAAGATGAAGAAGAGTGCAATGAAATTGAAGGAGAAGTTGAGAATGAAGAAGAAGAGGAAAAAGAAAAGCATGAAGAAGACGCTGTGATAAAGGGAACAAAAGTGGATTCAAAAGGGCTCCACTCAATTTCTGTTTCAGGAACTCCGGTGAATTATACACATGGGATTCCATTGCCCGATAGGAAGATATTGGAATTGATACTCGACAAGCTTCAGAAGAAGGACATATATGGCGTGTTTGCAGAGCCTGTTGATCCGGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCCATGGATTTCGCCACCGCGAGGAAGAAGTTGGCGACTGGATCTTATCCTACCTTAGAACAATTTGAGAGTGATATATTTTTAATTTGCTCAAACGCAATGCAATATAATGCACCGGAGACCGTATACCACAGACAGGCACGAACAATACAAGAACTTGGCCGGAAGAAGTTTGAAAAGTTAAGGATTAAATTCGAACGTACACAGGTTGAGCCAAAATCAGAACAGAAAACCCAGTCTAATTCTTCGGTTAAGAAGTCATTGAAAAAGCCACCAGGTTGGGCCTCACAAGAATCTGTTGGCTTTGATTCATCCTATGGAGATGTACAACCAGCTTCCTATCCAATGCAAGGTGGTAGTAGCTGTGAGAGGCCTGGCACCATTGATGGTATTCTGGAGGCAAATGCTTTCTTTATTGATGCAAATCAAGATAAAGCTGAAGATGTTTTGTCAGGGAAGAATATTCTCTCTAAGATGGGAAGGAAGTCATTTGTGCTTGACGAGAATCGTCGTGGATCTTATAATATATCTAATCAACTAATCAATAGACCAGATTCAACGTATATGACCTTTGAGAGTGGAATGAGACAGCTGGTCACTGTTGGCGTCCATGCTGAATATTCTTATACTAGGAGTTTGGCTCGTTTTAGTGCATCTCTAGGACCTGTTGTTTGGAAAATTGCTTCCCACAGGATTCAACAGGCACTTCCCGCCGACTGTAAATTTGGCCGTGGCTGGGTTGGAGAGTATGAACCGATTCCAACCCCAATATTTATGCTCACTAATCATCTACAGAAGGAAACTAGTTTGATTACAAAGTCGCACGGTGATAAAAATTGTAAGGACGTGGAGCCCAAAACTGAACATCCTGTTAATGGATGGATGGTTGAGGGAAAGCATTTTTCAGGTCCTGCAAGTGGGCCTGCATTTGAAGGAAATCCTTCTATTGGTTCTGCTGGAGTGAAGCCCAATGCTTCTCCTCCTAACATCCCAAATCAGCAGAATTCCCATTGTAGGAATTTAGGCGTACCCGAGAATAAGAGTTTGAAGAAAGGGGAGCCGGAATCTTTACCCTCAAGTAATCAAAATAATTCCAGTCTAGTTGCTAAGTTTGGAAGTAATACTCCTACAACAGAGTCTAAGACCAAAGAGATGGCGCCTAGGAACTTGAATACTTTGCCATCTAAAACTTTCAAGCCAGATACTAATGAAGTTGTCAGTGGAGAATTGCCTGATGGAAAAGTGATGAATACAAGCTTGAATGATCGATCAACTATTCCATCATCAGATAGTACCTCAAACCAAACAATCAGAGGAGCTCCTTTTCTTTTCCGTGGGCAGGAGCAGGGTCTCAGTGACTCAGTTAAGTCAATGAGAATGTTGACAGAAGAGGCTCAAAAGCCACAGACTTCTCATCATTCACCAGTTGATACTCTTCCGCAAATACCATCAGGTCCATCTGCACAAAGAGATGCCTCAGGCAATGCTTCAGCAGCAGCTGCTCAAACATGGATGTCTGCAGGGGCAGGACAGTTTAAACTAGGACCCGAGAGTTCTGGTTCATCCAAAAAGCAGATTTCTGCAGATTCTCTTCACAACTCTACAAGAGAGTTCCATCAGCATATTTCACGAATTCAGGGAGAGTTTCCTTCTGGTGGAACGTCTCTCCAGTCTAATAAGAACAATTTTCTATTTCATTCACCTAGACCTCAATCTAGTCACGTAGGTGCCGTTTCACAGGTCCCTAACCGACCTATGATTTTCCCTCAATCAACATCCGCGGACCAATCTAGATTTCAAATGCAGGCATCTTGGCAAGGTTCCAGTCCTCAAAGCCAACCAAGGCAGAAACAGGAAACTCTTCCGCCTGACTTGAATATTGATTGTCAATCTCCAGGCTCACCTGCAAAACAATCTTCTGGTGTTGTTGATTCACAGCAACCAGACCTAGCTTTGCAACTATGA 2526 0.441 MVQVAKRKKGRPSKADLARRAAEAQASATESDSRRSLRRKNVRYNIIDYDGDYIDDEEDERRREKKKLKLMTKLHQGEQEQELEDHAPMEDEEECNEIEGEVENEEEEEKEKHEEDAVIKGTKVDSKGLHSISVSGTPVNYTHGIPLPDRKILELILDKLQKKDIYGVFAEPVDPEELPDYHDVIEHPMDFATARKKLATGSYPTLEQFESDIFLICSNAMQYNAPETVYHRQARTIQELGRKKFEKLRIKFERTQVEPKSEQKTQSNSSVKKSLKKPPGWASQESVGFDSSYGDVQPASYPMQGGSSCERPGTIDGILEANAFFIDANQDKAEDVLSGKNILSKMGRKSFVLDENRRGSYNISNQLINRPDSTYMTFESGMRQLVTVGVHAEYSYTRSLARFSASLGPVVWKIASHRIQQALPADCKFGRGWVGEYEPIPTPIFMLTNHLQKETSLITKSHGDKNCKDVEPKTEHPVNGWMVEGKHFSGPASGPAFEGNPSIGSAGVKPNASPPNIPNQQNSHCRNLGVPENKSLKKGEPESLPSSNQNNSSLVAKFGSNTPTTESKTKEMAPRNLNTLPSKTFKPDTNEVVSGELPDGKVMNTSLNDRSTIPSSDSTSNQTIRGAPFLFRGQEQGLSDSVKSMRMLTEEAQKPQTSHHSPVDTLPQIPSGPSAQRDASGNASAAAAQTWMSAGAGQFKLGPESSGSSKKQISADSLHNSTREFHQHISRIQGEFPSGGTSLQSNKNNFLFHSPRPQSSHVGAVSQVPNRPMIFPQSTSADQSRFQMQASWQGSSPQSQPRQKQETLPPDLNIDCQSPGSPAKQSSGVVDSQQPDLALQL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05632 841 MobiDBLite consensus disorder prediction 256 288 - -
Vivi3g05632 841 CDD Bromodomain 149 245 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 485 721 - -
Vivi3g05632 841 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 840 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 84 112 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 540 589 - -
Vivi3g05632 841 SMART bromo_6 142 250 IPR001487 GO:0005515
Vivi3g05632 841 MobiDBLite consensus disorder prediction 1 41 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 506 529 - -
Vivi3g05632 841 Pfam Bromodomain 155 235 IPR001487 GO:0005515
Vivi3g05632 841 Coils Coil 95 115 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 734 841 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 702 720 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 650 691 - -
Vivi3g05632 841 MobiDBLite consensus disorder prediction 604 627 - -
Vivi3g05632 841 ProSiteProfiles Bromodomain profile. 161 231 IPR001487 GO:0005515
Vivi3g05632 841 Gene3D - 148 270 IPR036427 GO:0005515
Vivi3g05632 841 MobiDBLite consensus disorder prediction 70 122 - -
Vivi3g05632 841 SUPERFAMILY Bromodomain 144 248 IPR036427 GO:0005515
Vivi3g05632 841 PRINTS Bromodomain signature 164 177 IPR001487 GO:0005515
Vivi3g05632 841 PRINTS Bromodomain signature 194 212 IPR001487 GO:0005515
Vivi3g05632 841 PRINTS Bromodomain signature 212 231 IPR001487 GO:0005515
Vivi3g05632 841 PRINTS Bromodomain signature 178 194 IPR001487 GO:0005515
Vivi3g05632 841 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05632 Vivi-Chr3 123360933 123366561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05632 K22184 - gmx:100792844 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05632 3 123360933 123366561 Vivi3g05632 3 123360933 123366561 ECH
Vivi3g05632 3 123360933 123366561 Vivi7g02737 7 91380654 91386397 PCT