Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05630 ATGGAGAAACTGAGAAAACTTGTTAACGAGATAGCCTATACGAAGAACTTCAGTAAACTATCTCCACTTCATTTCTCTCTTCTCCCTTTCCTTTATACATCATCTTCTTTCTACAAACTCGCTCTCTCAATTCGCCACCGTTTCTTTCTCTCTCAAATCCATCGTTTGCCACTTCCTGTTATCAGCGTCGGAAATTTAACATGGGGAGGTAATGGCAAGACGCCAATGGTTGAATTCATCGCTCTCTTCTTTCATCGTTCCGGAATTTCACCTCTTGTTCTTTCTAGGGGTTATGGTGGTGGTGATGAAGTTAACATGCTTCGGAGGCATTTACTTGGAACATCAACTAAGTTTGGTGTTGGCGCAAATCGAGCTGCTGTTGCTAGTCATTTGATCCAAAAATATGGCCACATTGATATTCGCAAGAGTTTATGGCATGAGAAACAAAACCTTAACTGGAAGGCCCATAATTCTCTTGATTCAGAAAAGATTGGGATTGTTGTTCTTGATGATGCAATGCAGCATTGGAGCTTATGGCGAGATTTGGATATTATGATGGTCAACGGATTAACTCTTTGGGGTAACGGCCGACTACTGCCACTTGGACCTTTAAGAGAGCCTTTGACTGCACTCAGACGAGCAGATGTAGTTGTAATCCATCATGCAGACTTGGTTTCTGATCATGCTCTCGAGGATATTGAGTCTATGATCCAAGGAATTAAAAATTCTGCTCCTATTTTCTTGACAAAAATGGATCCAACTTACTTATTTGAAGTGGGAAACATCAATGCTAAAATATTGTTGACAGCTCTTCATGAAGCGACTATTTTATGTGTTTCCGCTATTGGTTCTCCAGAACCTTTTGTGAAGCGGGTTCAAGAGATGGGAGCACTATATGTTGATCGGATAGATTTCAGCGATCATCACATATTCCATGCCAGGGATATTGGTATGATCAGAGCCAGACTTGGAGAACTAGAGAGGAAGTTTGGTTTCAAACCAATTGTTGTAGTAACTGAGAAGGATTATGATAGAGACCCTGAAATTCTTAAGCAACTTTATCCATTTAAAACTTTTGTTCTGTGTTCTACATTGAAGATTTTACCCTATAGAGGAAACAATGAAGATAGCTTTAAGAAATTTCTTAAGGACAAATTGAAACTAGAATTGCGTGCATCTGATTAA 1185 0.3949 MEKLRKLVNEIAYTKNFSKLSPLHFSLLPFLYTSSSFYKLALSIRHRFFLSQIHRLPLPVISVGNLTWGGNGKTPMVEFIALFFHRSGISPLVLSRGYGGGDEVNMLRRHLLGTSTKFGVGANRAAVASHLIQKYGHIDIRKSLWHEKQNLNWKAHNSLDSEKIGIVVLDDAMQHWSLWRDLDIMMVNGLTLWGNGRLLPLGPLREPLTALRRADVVVIHHADLVSDHALEDIESMIQGIKNSAPIFLTKMDPTYLFEVGNINAKILLTALHEATILCVSAIGSPEPFVKRVQEMGALYVDRIDFSDHHIFHARDIGMIRARLGELERKFGFKPIVVVTEKDYDRDPEILKQLYPFKTFVLCSTLKILPYRGNNEDSFKKFLKDKLKLELRASD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05630 394 NCBIfam tetraacyldisaccharide 4'-kinase 35 310 IPR003758 GO:0005524|GO:0009029|GO:0009245
Vivi3g05630 394 Pfam Tetraacyldisaccharide-1-P 4'-kinase 29 385 IPR003758 GO:0005524|GO:0009029|GO:0009245
Vivi3g05630 394 Hamap Tetraacyldisaccharide 4'-kinase [lpxK]. 7 391 IPR003758 GO:0005524|GO:0009029|GO:0009245
Vivi3g05630 394 PANTHER TETRAACYLDISACCHARIDE 4'-KINASE 1 387 IPR003758 GO:0005524|GO:0009029|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05630 Vivi-Chr3 123317345 123321005 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05630 K00912 - gmx:100789612 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05630 3 123317345 123321005 Vivi3g05630 3 123317345 123321005 ECH