Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05613 ATGGAAAATACAGATAAAGTTGGAGATGCAAGCATAACTGCTAGAGCTATTCCAATTCATGATGAAAAAATGAGCATTCTTCATATGAAAAATGATCTTGATGCCAAGGCTTTAGAAGGATTTCCCTCGGTTGAAGGCTTAACTGCTGCGGCTGAAAGGCCTATTCCTCCATCTTCTGTCCTGAAGCAATTGGCAATAGCTGTTAAGGCTGGAAGGAAAGCAAATTCAATGAAAGATTTTATAGCTTCATCAGGAGGTTCTTTGCCTTCGATGGAAAGAGGAGGCTTAAGTCTCTCTGCGGTGAAGGCATTAGTGTTACGTGAGAAAGATGACAAACTTTCTTCTGAGTTTTGTAGCCGCGAGAAAGTTTTGGATTTGATTAATTCTCTTTTTAATCCAGAGGGAGAGTTCCTTAGAAGGAAGATCAACTCCAATCCCAACGAAATTGACTTATCTTTTATAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTCGCTGAAGTAATCGGAAACTTCAAGACCCTTCGAGAAATGGAATTTTTTTGGTGCAGTGTTGTTGCTGAAACGAGAAAACATTGGTACGAAGAAAAGCATTTACCTGGAGTCCCCCTTGACGATATTCCCGATCTGAAGTCATGTCTTCTCTATCAGCAAATTCAAGTGATTAATTGTTGCATTTCTCGGAAAAGGCGCCATATCATTGCCAATGAATCACTGGACTCTATGATGATGAAAGCAAATTTGAATACATTAGAATCAACGAACTTCTGTGACGGAACTTCTGCAAGTCGTTTGTTATATGCTCGATTAAGTACTGGAGAGCTTGTTCTTCGACTTGGTGCCCATTGTCCATTCGGAAATGTGACACTATTGGAAACTGGCGAGCCTGCGTACTCTCCTATCACCCAGGAAGTACCGTTGCTTACAGAAGATCTGATCAAAGAGACCGAGGAGTTTGTGCTGCGGACGGGAAGTCTTGGAGCCGGGTGCTCTCAACTTTTGTCTGATATGCAGGCTTTCAAGGCTGCAAATCCAGGTTGTATTTTGGAAGACTTTGTGAGATGGTACTCTCCTCCTGATTGGATTGAAAACGAAGCAAATAGCGATGATAGTTATTCTTCTGATGATAGTAGTAGCGAGTCATTGTCTATCAGAGGTCAACTAAGTCAACGGATGCGAAAAGAAGGTAATTTGTGGCACGAATTGTGGATAACATCTAAGCCAGTACCTGCTGTGAAACAAACACCTCTCTTTGAAGAAGATTTGGCAGTGGAGGGAATCCTTGACGCATTTGAGGACATTCCACCAGTTGAGCTTTTTGGTCAGCTTTTTGTTTCACTTCTTGGTTTAGGATTTACAATTGCCGAACCATTGCTATACCGTAACGTTGTCTTCTCAAAGTTATTCAATGACTGCAAGGATTATGTAGTTACTACTTGCGAAAGCATTAGATTCAGCGAAAAAGTTGATGAACTTGTTCAGGTATATGAAACAGTGGAGAGAATGTTGATGAATCCGGAGGAGGCACTGAAGCTAATGAAGCATTCAGAAGAATCAACTGTGAATACCGACAGTGAAACAAAGGCCCGGTTCAAGAAGTTTATCTCTAGTGGCAAAGAGAAATTGTCGAGGTCTTTACGGAAAGATCAGATCAACAATGAAGAAAAAGCGACTCCACAATCTTCTTCAAGTTTCTTAAGGTCTTTTCGGAAAGATCAGATCAACAATGAAGAAAAAGGGACTCCACAGTCTTTTTCAAGTTTCTTTGACAGCAAGTCATCTTTATTCTCAAAAAAGTCTACCAAAGGTGGAAAGTTATCCTTTGATCCGGCACCTCCCTCTTTCGAAGACGATTTGATAGTAAATTAA 1881 0.4083 MENTDKVGDASITARAIPIHDEKMSILHMKNDLDAKALEGFPSVEGLTAAAERPIPPSSVLKQLAIAVKAGRKANSMKDFIASSGGSLPSMERGGLSLSAVKALVLREKDDKLSSEFCSREKVLDLINSLFNPEGEFLRRKINSNPNEIDLSFIRDIHGAPPESLVVKLAEVIGNFKTLREMEFFWCSVVAETRKHWYEEKHLPGVPLDDIPDLKSCLLYQQIQVINCCISRKRRHIIANESLDSMMMKANLNTLESTNFCDGTSASRLLYARLSTGELVLRLGAHCPFGNVTLLETGEPAYSPITQEVPLLTEDLIKETEEFVLRTGSLGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWIENEANSDDSYSSDDSSSESLSIRGQLSQRMRKEGNLWHELWITSKPVPAVKQTPLFEEDLAVEGILDAFEDIPPVELFGQLFVSLLGLGFTIAEPLLYRNVVFSKLFNDCKDYVVTTCESIRFSEKVDELVQVYETVERMLMNPEEALKLMKHSEESTVNTDSETKARFKKFISSGKEKLSRSLRKDQINNEEKATPQSSSSFLRSFRKDQINNEEKGTPQSFSSFFDSKSSLFSKKSTKGGKLSFDPAPPSFEDDLIVN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05613 626 Pfam Rab3 GTPase-activating protein catalytic subunit 282 436 IPR026147 -
Vivi3g05613 626 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 48 608 IPR045700 GO:0005096|GO:0043547
Vivi3g05613 626 MobiDBLite consensus disorder prediction 599 626 - -
Vivi3g05613 626 MobiDBLite consensus disorder prediction 549 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05613 Vivi-Chr3 121512169 121517184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05613 K18270 - gmx:100788608 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05613 3 121512169 121517184 Vivi3g05613 3 121512169 121517184 ECH
Vivi3g05613 3 121512169 121517184 Vivi7g02731 7 91334718 91342056 PCT