Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05476 ATGGGAGATAATGTTGTAGTGTCCAATATGGAGCTTGAGAGGTTGTTTAGCATGAAAGGTGGGAAAGGAGAAGCTAGCTATGCCAACAATTCCCAAGCTCAGGCCATACATGCAAAATCTATGCTTCATCTTCTAAAAGAAGCACTAGACGGAGTTGAGCTTCATGCACCAGACATTCCATTTGTGGTGGTGGACTTGGGCTGTTCATGTGGAAGCAACACAATCAATGTTATGGATGTGATCGTAGAACACATCATCAAGCGTTATGAAGCATTGGGGCGCAATCCACCTGAATTCTCTGCTTTTTTCACTGACCTTCCGAGGAATGACTTCAATACCCTCTTTCAACTTCTTCCTCCTATGGCCAACTATGGTAATAGCATGGAAGAGTGCCTTGCTGCTAATAATCATCGTTGCTACTTTGCTGCGGGTGTCCCCGGTTCTTTCTACCGGAGACTTTTTCCGGCTAAGTCTGTTGATTTTTTTCACTCTGCATTTTCTTTGCATTGGTTATCTCAGGTACCAGAATCTGTTGAAGTCAAGAGATCAAATGCATACAACAAAGGAAGGGTGTTTACCCATGGAGCTAGTGAGATAACAACAAATGCTTACAAGAAACAATTCCAAACAGATTTGGCAGGTTTCCTCACCTCAAGGTCAATAGAGATGAAAAGTAAAGGGACCATGTTCTTGGTTTGTTTAGGCAGGACTTCAGTGGACCCCACAGACCAAGGTGGGGCTGGTCTCCTCTTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGGCTAATTACAAATGAGAAAAGAGATGATTTCAACATTCCTGTTTATGCACCAAGTTTGCAAGACTTCAAGGAAGTGGTTGAGGCTGATGGTTCATTTTCCATTAACAAACTTGAGGTTTTCAAAGGAGGGAGTCCTCTTGTGGTGAACCAACCTGATGATGCAAGTGAAGTGGGAAGGGCTTTGGCTAACAGTTGTAGAAGTGTTGCTGGTGTTCTTGTTGATGCTCATATTGGTGATAAGCTAAGTGAGGAGCTTTTTCTTAGAGTGGAGAAAAGAGGCACCAATCATGGCAAGGAGTTGTTAGAGAAACTTCAGTTTTTTCACATTGTTGCATCACTTTCTTTTGTTCAATGA 1152 0.4297 MGDNVVVSNMELERLFSMKGGKGEASYANNSQAQAIHAKSMLHLLKEALDGVELHAPDIPFVVVDLGCSCGSNTINVMDVIVEHIIKRYEALGRNPPEFSAFFTDLPRNDFNTLFQLLPPMANYGNSMEECLAANNHRCYFAAGVPGSFYRRLFPAKSVDFFHSAFSLHWLSQVPESVEVKRSNAYNKGRVFTHGASEITTNAYKKQFQTDLAGFLTSRSIEMKSKGTMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLITNEKRDDFNIPVYAPSLQDFKEVVEADGSFSINKLEVFKGGSPLVVNQPDDASEVGRALANSCRSVAGVLVDAHIGDKLSEELFLRVEKRGTNHGKELLEKLQFFHIVASLSFVQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05476 383 Gene3D - 16 362 IPR042086 -
Vivi3g05476 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 17 360 IPR005299 GO:0008168
Vivi3g05476 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 380 IPR029063 -
Vivi3g05476 383 Gene3D Vaccinia Virus protein VP39 30 309 IPR029063 -
Vivi3g05476 383 Pfam SAM dependent carboxyl methyltransferase 60 379 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05476 Vivi-Chr3 114181484 114183867 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05476 K18848 - gmx:100801476 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05476 3 114181484 114183867 Vivi3g05476 3 114181484 114183867 ECH
Vivi3g05476 3 114181484 114183867 Vivi7g02687 7 90819368 90822006 PCT