Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05462 ATGACAATGCTTTCCCTAAAAAACCCCAACAAGCTACTCCCACCCTCTTCCATTCCCACTCCAATTTCTCACACTTCACTCTCTTCTTCATTCACTCTCAGAAGCTGTGTTTCACTGAACCCTAGATTAAGAACCAGTAACACTGAACCCCTGCGACGTCGTTTTAGACCCGTTAAATGTTCATTTTCATCTGTTGATAATGCTAAGATTAAGGTTGTTGGTGTTGGTGGCGGTGGCAACAATGCTGTTAATCGTATGATTGGTTGCGGATTACAGGGTGTGGACTTTTATGCTATAAATACTGATGCTCAAGCACTGGTTCATTCTGCTGCTGAAAATCCTATCCAAATTGGAGAACTCTTGACCCGTGGATTAGGTACCGGTGGTAATCCACTTTTGGGGGAACAAGCTGCCGAGGAATCAAAAGAAACTATTTTTAATGCCCTTCAAGGATCTGATTTAGTGTTTGTAACTGCCGGTATGGGGGGTGGTACAGGGTCTGGTGCTGCTCCTGTTGTGGCCCAGATAGCAAAAGAGGCTGGCTACTTAACCGTAGGTGTTGTTACTTATCCATTCAGTTTTGAAGGACGCAAAAGATCATTGCAGGCACTAGAAGCCATCGAAAAGCTGCAGAAAAACGTGGATACACTTATAGTGATTCCAAACGACCGACTTCTTGACTTAGCTGATGAGCAGACGCCTCTTCAGGATGCTTTCCAGCTTGCTGATGATGTTCTACGACAGGGAGTACAGGGAATATCAGACATCATAACAATACCTGGTCTTGTAAATGTGGATTTCGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCCTCTGGTAAAAACCGTGCAGAAGAAGCTGCAGAACAGGCTACTTTGGCACCTTTAATTGGATCATCTATTCAATCCGCTACCGGAATAGTTTATAATATTACCGGAGGAAAAGACATAACTCTGCAGGAAGTGAATCGAGTGTCTCAGGTTGTGACAAGTTTAGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGACGATCGCTACAATGGCGAGATTCATGTGACTATCATCGCAACTGGCTTCTCACAATCCTTCCAAAAGATACTACTAACGGATCCAAGGGCTGCAAAGCTTCTTGACAGATTACCAGTGGGAATATAA 1191 0.4366 MTMLSLKNPNKLLPPSSIPTPISHTSLSSSFTLRSCVSLNPRLRTSNTEPLRRRFRPVKCSFSSVDNAKIKVVGVGGGGNNAVNRMIGCGLQGVDFYAINTDAQALVHSAAENPIQIGELLTRGLGTGGNPLLGEQAAEESKETIFNALQGSDLVFVTAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDLADEQTPLQDAFQLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKILLTDPRAAKLLDRLPVGI 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05462 396 Hamap Cell division protein FtsZ [ftsZ]. 65 395 IPR000158 GO:0003924|GO:0005525
Vivi3g05462 396 CDD FtsZ_type1 85 370 IPR000158 GO:0003924|GO:0005525
Vivi3g05462 396 Pfam Tubulin/FtsZ family, GTPase domain 69 229 IPR003008 GO:0005525
Vivi3g05462 396 FunFam Cell division protein FtsZ 1, chloroplastic 234 371 - -
Vivi3g05462 396 Gene3D - 277 381 IPR037103 -
Vivi3g05462 396 SMART Tubulin_4 69 261 IPR003008 GO:0005525
Vivi3g05462 396 ProSitePatterns FtsZ protein signature 1. 100 134 IPR020805 GO:0005525
Vivi3g05462 396 Gene3D Tubulin/FtsZ, GTPase domain 61 276 IPR036525 -
Vivi3g05462 396 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 49 376 IPR045061 GO:0003924|GO:0005525
Vivi3g05462 396 SUPERFAMILY Tubulin C-terminal domain-like 263 377 IPR008280 -
Vivi3g05462 396 ProSitePatterns FtsZ protein signature 2. 153 174 IPR020805 GO:0005525
Vivi3g05462 396 FunFam Cell division protein FtsZ 1, chloroplastic 62 276 - -
Vivi3g05462 396 Pfam FtsZ family, C-terminal domain 278 371 IPR024757 -
Vivi3g05462 396 PRINTS Cell division protein FtsZ signature 268 289 IPR003008 GO:0005525
Vivi3g05462 396 PRINTS Cell division protein FtsZ signature 154 174 IPR003008 GO:0005525
Vivi3g05462 396 PRINTS Cell division protein FtsZ signature 245 267 IPR003008 GO:0005525
Vivi3g05462 396 PRINTS Cell division protein FtsZ signature 182 203 IPR003008 GO:0005525
Vivi3g05462 396 SMART Tubulin_C_4 263 380 IPR018316 -
Vivi3g05462 396 SUPERFAMILY Tubulin nucleotide-binding domain-like 68 264 IPR036525 -
Vivi3g05462 396 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 162 168 IPR017975 GO:0005525|GO:0005874|GO:0007017
Vivi3g05462 396 NCBIfam cell division protein FtsZ 65 375 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05462 Vivi-Chr3 113220802 113224069 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05462 K03531 - gmx:100809043 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05462 3 113220802 113224069 Vivi3g05462 3 113220802 113224069 ECH