Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05429 ATGGCTCTTCCTCATCTACTTCTTCTGCTTAGTCTTCATTGCTCACTGTTTGTAGCATTGGTATCTGGCTGGAAGACATTGCAAGGATCACCGCCGGTGGTAATAGCACGCGGCGGATTTTCGGGGTTATTTCCAGATTCTAGTTTACTTTCCTACAACTTGGCACTAAAAACTATTTCCCCAAATGTGACTTTATGGTGTGACTTGCAACTGACAAAGGATGGAGTTGGGATATGTTTTCCAGACATCAAGCTTGACAATGCCACTGACATTATCGCTGTTTACCCCAACCAAGCCAAGGATTACTCGGTTAATAAGGTTCCAATTCGCGGATGGTTTTCTGTTGATTACAGTTTCAACGAACTAGCCAATGTTTCGCTTGTTCAGGGAGTGTTTTCTCGAACGCCATCGTTTGACGGACGGAAGTCTCACATTCTCCGTGTCGAAAACGTAGCTAAATTAGTAAAATCGCCATCAACAGGCCTATGGTTAAACGTTCAGCATGATAGATTCTACAAGCATCACAATTTGAGTGTCGAGAAATATCTTCACTCACTTTCAACTAAACAAGTATCTATCAGTTACATCTCATCGCCAAACGCAGATTTCTTAAGAAGAGTAAGATCAAACTCGGGTCTTAGAAAAAGCGTCACAATCTTCAGGTTTCTCGAGCAACATGAAATTGAACCTACAACCAACAAAACTTATGGCGCACTAGTGAAAAACCTCGAATTTATCAGAACATTCGCTTCGGGAATTCTTGTTCCTAAAGGCTATATATGGCCTGTAGACTCGGAACTTTATCTACATAAACACACTTCTCTTGTCTCCGATGCTCATAAACAAGGGCTCAAAGTTTTTGTTTCGGACATTGTTAATGATGTTCCATTCAGCTACAACTTCAGCTATGATCCTTTGGCTGAATGTTTGTCTTTTATCGACAACGGTGACTTCTCTGTCGACGGCATTCTGTCCGATTTTCCTGTAACTCCATCTGTAGCCATAAATTGCTTTTCTGGCGTAAGACGAAATTCCAAAAAACAAGTTGATACTTTGATTATATCAAAGTATGGAGCAAGTGGAGACTATCCTGCATGTACCGATCTTGCGTATAAGAAAGCGAAATCAGACGGAGCAGATGTAATTGATTGTCCTGTTCAAATCTCCAAGGATGGAGTACCCTTTTGCTTAAGTTCTATAGATCTTTCAACGACCACAACTGTGGCTCAAACGAAATTCCGAACTCGTAAAACTATTATTCCAGAGATTCAAAAGGGCAGTGGCATATATACGTTTAGCTTGACATGGAATGAAATCAAAACACTGACTCCATCAATATTGAAACCTTATGAGAAATACCTATTGTTCCGGAATCCGAAATTCAAAAATCAAGGGAAATTCATAACTTTGTCTGAGTTTTTGTCCTTGGCTAAAGGCTCTCGTGTTTTGATCAACATCGAGAATGCTGCCTATCTTGCATCGAAGCGGGGACTAAGCGTGACAAAAGCAGTCCTTAACGCTCTACAAAAAGCTGGTTACGATAAACCGAGATCTCCTAAAGTTATGATCCAATCAACGCACAGTTCGGTACTAAAGGTATTCAAGGATAAATCCAAATATGAAAGGGTTTACGAAGTTGATGAAAATATCCGCGATGCTGACGATAAAGCTATTGAAGATATCAAAACATTTGCTGATTCTGTTGTGGTAAAAAAAGCTTCCGTCTTTACTCAAAATGCAGCATTTCTTGTTAACTCTACAACAACCGTGGCAAGGTTTCATTCATTTAAGCTACCAGTTTATGTAGAAACATTCAGCAATGAGTTTGTATCTCAAGCATGGGATTACTACTCAGATGCATTTTTCGAGATTAATTCATTTGTCATTGGCGCCAAGGTTAACGGTATTATTACCGACTTCCCTAAGACTGCTGCACGATACACAAGGAACAAGTGTTTAAAGCATGGCAAAAAACCACCTTATGTGAACCCTATTGAACCTGGAAAACTTTTGAGGCAAATTTCTAAGTCATCTCTTTTATCACCTTCCCCTCCACTTCCAGTCTTACATGATAGTAATGTCACAGAGCCACATTTGCCAAGTGTTTCTGGAAATTTTCCGATTTTCGGCGGGGCTCGTTGA 2142 0.4015 MALPHLLLLLSLHCSLFVALVSGWKTLQGSPPVVIARGGFSGLFPDSSLLSYNLALKTISPNVTLWCDLQLTKDGVGICFPDIKLDNATDIIAVYPNQAKDYSVNKVPIRGWFSVDYSFNELANVSLVQGVFSRTPSFDGRKSHILRVENVAKLVKSPSTGLWLNVQHDRFYKHHNLSVEKYLHSLSTKQVSISYISSPNADFLRRVRSNSGLRKSVTIFRFLEQHEIEPTTNKTYGALVKNLEFIRTFASGILVPKGYIWPVDSELYLHKHTSLVSDAHKQGLKVFVSDIVNDVPFSYNFSYDPLAECLSFIDNGDFSVDGILSDFPVTPSVAINCFSGVRRNSKKQVDTLIISKYGASGDYPACTDLAYKKAKSDGADVIDCPVQISKDGVPFCLSSIDLSTTTTVAQTKFRTRKTIIPEIQKGSGIYTFSLTWNEIKTLTPSILKPYEKYLLFRNPKFKNQGKFITLSEFLSLAKGSRVLINIENAAYLASKRGLSVTKAVLNALQKAGYDKPRSPKVMIQSTHSSVLKVFKDKSKYERVYEVDENIRDADDKAIEDIKTFADSVVVKKASVFTQNAAFLVNSTTTVARFHSFKLPVYVETFSNEFVSQAWDYYSDAFFEINSFVIGAKVNGIITDFPKTAARYTRNKCLKHGKKPPYVNPIEPGKLLRQISKSSLLSPSPPLPVLHDSNVTEPHLPSVSGNFPIFGGAR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05429 713 SUPERFAMILY PLC-like phosphodiesterases 351 647 IPR017946 GO:0006629|GO:0008081
Vivi3g05429 713 CDD GDPD_SHV3_repeat_1 32 334 - -
Vivi3g05429 713 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 349 648 - -
Vivi3g05429 713 SUPERFAMILY PLC-like phosphodiesterases 31 330 IPR017946 GO:0006629|GO:0008081
Vivi3g05429 713 Gene3D Phosphatidylinositol (PI) phosphodiesterase 31 332 IPR017946 GO:0006629|GO:0008081
Vivi3g05429 713 Gene3D Phosphatidylinositol (PI) phosphodiesterase 350 648 IPR017946 GO:0006629|GO:0008081
Vivi3g05429 713 ProSiteProfiles GP-PDE domain profile. 32 335 IPR030395 GO:0006629|GO:0008081
Vivi3g05429 713 ProSiteProfiles GP-PDE domain profile. 351 648 IPR030395 GO:0006629|GO:0008081
Vivi3g05429 713 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 705 - -
Vivi3g05429 713 Pfam Glycerophosphoryl diester phosphodiesterase family 358 643 IPR030395 GO:0006629|GO:0008081
Vivi3g05429 713 Pfam Glycerophosphoryl diester phosphodiesterase family 39 294 IPR030395 GO:0006629|GO:0008081
Vivi3g05429 713 CDD GDPD_SHV3_repeat_2 352 647 - -
Vivi3g05429 713 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 30 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05429 Vivi-Chr3 112099560 112103962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05429 22 707 Receptor kinase-like Gene Family AT4G26690 55.797 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05429 - - tpra:123914082 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02672 7 90614207 90618685 Vivi3g05429 3 112099560 112103962 PCT