Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05421 ATGAACAAAAGGGTTCTGATTCGGATCCTACTGTTCCTCATCGTCTTCAACTCCTTCTATCTCTGTCTCTACTTCATCCACCACAACTCTTCAAATCCTTTCCCAAAAAAGCCACCTTTCAAACGACCCTTCATAGAGATACAACAAAAAACCCATCTCTCTAAACCATGGCCAATTCTACCCTCTTACTTACCATGGTCAAAAGCTTCGATTTTTGTTCCTCCACGCTCCTGTGAAGGCTTTTTCGGAAATGGGTTTACGCGCCGTCTTGAGGTTTTTTCCGGGGATGGTGGAGGTGGGTGGTTTAGGTGTTGGTACAGTGAGAGTTTGAGGAGTTCGGTTTGTGAAGGCGGGAGGGTGAGGATGGTGGTGGAGAAGATTGAAATGGCGAAGGGTGGGGAGAGTTTGGTTGATGTAATTGGGAGAAGCGAAGAGGCGGAGTTACCGGTGTTTCGAGACGGCGCGTTTGAGGTTGATGGGGGTGAAGGGTTTGGAGGTGAAGGGAAATTGATTGTTGATGGGGAGTTTCTGGATCGGTATGTTCCGGAAGGGGAGATTGTGAGACATACTATGAGGGATTTGATTAGCAAGATTCGGGTTGTTGGAAGGAAAGAATTTGCTTGTGATCAGTGGATTGAGGAACCGACACTTCTGGTGACACGCTTTGAATATGCAAATCTTTTTCACACTATTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTTACCGGCTTGCCTAATCGACCTCATTTGATCTTTGTCGATGGACACTGTACGGCTCAACTTGAAGAGACATGGAAAGCGTTATTCTCGAGCGTCAGATACGCTAAAAACTTCAGCGGATCAGTTTGTTTTCGCCATGCTATTCTCTCGCCTTTGGGATACGAGACTGCGCTATTTAAAGGGCTAACGGAAGAAATATTTTGCGATGGAGCTTCAGCACAAGAGCTGCGACAAAAGCCTGATGATCTAAAAACCGCACGTCTTTCTGAGTTTGGAGAAATGATAAGAGCAGCATTTGAATTACCTTTAAACTTAAACCATAAACTACCAGTTTCTGGAGGACATAATGTCCTTTTTGTTCGTCGGGAAGATTATTTAGCTCATCCACGTCACGGTGGTAAAGTTGAATCAAGACTAACGAACGAGGCAGAGGTATTCGAATCTTTGAAGAGTTGGGCGTCTAATTACAAAGGATGTAAAATCAACCTCGTCAACGGATTGTTCGCGCACATGTCTATGAAAGAGCAGGTACGAGCTATTCAAGATGCATCGGTGATCATTGGTGCTCACGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTAGAGATCATTAGCAGCCAGTTCAGGCGTCCACATTTTGCGTACATTGCGCGGTGGAAAGGGTTGGAGTATCATGCAATTAACCTTGACGGGTCGTATGCAAATACCGAAACTGTAATCAATGCGCTGGTCAGCATAATGAAAAGCCTTCGATGTTGA 1503 0.4491 MNKRVLIRILLFLIVFNSFYLCLYFIHHNSSNPFPKKPPFKRPFIEIQQKTHLSKPWPILPSYLPWSKASIFVPPRSCEGFFGNGFTRRLEVFSGDGGGGWFRCWYSESLRSSVCEGGRVRMVVEKIEMAKGGESLVDVIGRSEEAELPVFRDGAFEVDGGEGFGGEGKLIVDGEFLDRYVPEGEIVRHTMRDLISKIRVVGRKEFACDQWIEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTGLPNRPHLIFVDGHCTAQLEETWKALFSSVRYAKNFSGSVCFRHAILSPLGYETALFKGLTEEIFCDGASAQELRQKPDDLKTARLSEFGEMIRAAFELPLNLNHKLPVSGGHNVLFVRREDYLAHPRHGGKVESRLTNEAEVFESLKSWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLDGSYANTETVINALVSIMKSLRC 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05421 500 Pfam Glycosyltransferase 61 323 449 IPR007657 GO:0016757
Vivi3g05421 500 PANTHER GLYCOSYLTRANSFERASE 9 477 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05421 Vivi-Chr3 111881214 111885838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05421 K03714 - gmx:100810186 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05421 3 111881214 111885838 Vivi3g05421 3 111881214 111885838 ECH