Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05403 ATGTCATCAAACCAGAACCTAAAAGACCTACAATGGTTTCTTCAAGCAATCACCATGGAGAACCAAACCCTACACAGCATTTCCTTCTACCTTTTCCAACCAACTTCACATTGTTACCAAGAAACAAACAACTCCATAAACATAAACATCTCCCAGGAAAATCATCACCACTTTTCCAACCTCTTAACCTCACTAGCATCATCATCATCCAACAACACAAACCCCACTTTAAGAAACCTGGAGTTTCACAGAGTTGAATGGGAGTCACAACAGGTAAAAAGCCTTGGAACCCTTCTCAATAATCACCAAACCATAAAGCAAATTCTTTTCAAAAGAAACAGGTTCAATGGAAGAACAATGTCAGATCTTTCTGACATTTTGAAGGAAAACAAAGTGATTAAAGAGATTATGTTTTCAGAATCATGCATTGGTTCTATTGGAGCTGGATTAATAGCTTCTTCTCTTATGGTGAACCATAGTTTAGAGGAGTTACAGATTTGGGAAGATTCAATAGGTTCAAGAGGTGCTGAAGAGATTTCAAAGATGATTGAAGTTAATCCATCTCTTAAGCTGTTAACAATTTTCGACTCGAGTTTCATCACTGCTACGCCTCTTATATCGTCGGTTTTGGCGAGGAATCGGGCTATGGAAGTGCATGTTTGGAGCGGTGAACGAAATGGCGAAAGAAGTTCTAAGGTTGTTGAGTTTGTACCTGGTGACAATACGCTTCGAATTTACAAGCTTAATCTTTCAGGTACTTGTAGGGTTGCTTGTTCTTTAGGAATGAATTTGACTGTTAAATCACTTGACATGACTGGTGTGAAGATAAAATCGAAATGTGCTAAGGAGTTTAGATGGGTTTTAGAACAAAACCAAACGCTAAAAGAAGTTAATTTTTCAAGAACATGTCTTAAAGATAAGGGTGTTGTGTACATTGCTGCTGGGCTATTCAAGAATCATAGTCTGCAAAAGTTATATCTAACCGGAAATTTGTTCGGTGGAATAGGCGTCGAGCATTTACTTTGTCCTCTGAGTAGGTTTTCGTCCTTGCAAATGCAGGCTAACGTTAGTTTGAAGTGTGTTACTTTCGGAGGAGGGGGAACGAGAATAGGAAGAGATGGTTTAGCAGCTATAACACGGTTTTTAATGACGAATGAGACGGTGACGCGGTTCGGGATACATGATGATGAGAGTTTGAGACCGGATGATTTTGTTAAAATCTTTAAGAGTTTAGAGAAGAACGCGAGTTTGAAATGTTTGTCGTTGCAAGGTTGTAAAGGTGTTCAAGGAGAGACATTGCTGGAGATAATTATGGAGACATTGCAGATTAATCCTTGGATTGAAGAAGTTGATCTTTCAAGAACACCTTTACATAATTCTGGAAAGACTATTGCGATTTATCAGAGATTAGGGCAGAATGAGAATCCTGAACCAGAAATTGATTTGATCAAAGACATGCCTATGACTGAGCCTAAGAGTTGCAGAGTTTTCTTTTGTGGACAAGAATATGCAGGCAAAACGGCGCTTTGTCAATCAATATCACAAAACTTCTCGGCTTCGCCGGCACTTCCCTACTTGGATCAAGTAAGAACAATAGTGAATCCAGTGGAGCAGGCTGTGAAAACAGTAGGAATGAAGATAAAAACATTCAAGGATGAGGATACAAAGATTTCGATATGGAATCTTGCTGGTCAACACGAGTTTTTCTCCCTCCATGATCTTATGTTTCCGGGGCACGGTAGTGCGTCGATTTTCATCATCGTATTGAGTTTATTCAGGAAGCCGAGCAACAGAGAACCAAAAAGCACTGCCGAGATTGAAGAGGATTTGCAATATTGGCTAAGGTTTATAGTTTCCAACTCCAAAAGAGCAGTGCAACAATGCATGCTACCGAGTGTAGCTGTTGTTCTTACTCACTTCGATAAAATCAACCAATCATCGCAAAATCTGCAGCAAACTGTTGATTCGATTCAGAGATTGAGAGACAAGTTTCAAGGCTATGTTGAGTTCTACCCGACTGTATTCACGGTCGATGCAAGATCATCAGCATCAGTTAGCAAACTCACTCATCACATCCGAAAGACGTGCAAAACAATTCTTCAAAGAGTACCGCGAGTCTATCAACTTTGCAATGATCTAATACAGATTTTATCAGAGTGGAGATCAGAGAATTACAACAAGCCAGCAATGAAGTGGAAGGAGTTTGGTGATCTGTGTCAAGTAAAAGTCCCGTATTTGAGAATCCGGTCGAGACATTATAATAAAGAGGCAGTTGAAATGAAGCGAAAAGCTATCGCTACTTGTCTTCATCAAATTGGTGAAGTGATTTATTTTGATGAGTTGGAGTTTCTAATTTTAGATTGTGAGTGGTTCTGTGGTGAAGTGCTTGGTCAGCTCTTAAAGTTGAATGTTAAAAAGCAACATTCTTCGGAAAACAATGGATTCGTTAGCGGGAAGGAACTGGAGAAAATTTTAAGAGGAAGTTTACAAAGTTCAATTCCTGGTATGGGATCGAAGGTGTTTGAGAACTTAGAAGCGGGTGATCTTGTCAGAATGATGCTTAAACTTGAACTTTGTTACGAGCAAGATCCATCAGATCAAAATTCTCTATTATTGATCCCCTCGATTCTTGAAGAAGGTAGAGGAAAGCATCAGAGGTGGCAGATAAGCTCACCAGATTGCCTTTATGCCGGACGCCATCTTGAATGTGATGATTCAAGTCACATGTTTCTAACTCCTGGATTCTTTCCTCGCTTACAGGTGCATCTTCACAACAGAATAAAGTCTCTGATGAATCAACATGGTGCAACTTACAGTCTCGAGAAGTACCTCATTTCGATCAGCATTAATGGAATCTACATCAGAGTTGAGCTTGCAGGACAACTCGGTTACTATATCGATATCCTCGCATGCTCCACCAAAAACATGACAGAAACTTTAAGAGTCATTCAGCAACTTATAATCCCAGCAATTCAAAGTGTTTGCCATGGGATCACCATGACGGAAAATATCATTAGACCTGAGTGCGTGCGAAATTTGACTCCCCCTAGATACAGAAGAACTCAATTTGCTTCCTTGCAGCAACTGAAACAAGCGCTCCTATCACTTCCGGCAGACAGCATGTATGATTATCAACACACATGGAGTTCGGTAATGGATTCTGGAAGGCCTATTCTCCAAGAAGGGTTTGATTTTGCACGAGACCTTTTATCGGATGATGACTTCCGCGAAGTGCTTCATCGCAGGTATCATGACCTACACAATCTTGCGCAGGAGCTGCAAATCCCACCTGAAAACAACACTGAAGGGCAAAACCAAGCTGTAACTGTAAGCAATGAAGCTGAAAAAGTCGAACCATCCTTTGGTGGCATTGCAAAAGGGGTTGAAGAAGTTTTACAAAGACTTAAAATTATTGAGCAAGAAATTAGAGACGTGAAACAAGAAATCCAAGGGATGAGATATTACGAACACAGACTCCTACTTGAGCTTCATCGCAAAGTAAATTACATAGCAACCTTCAATTCTCAAGTTGAGGAGAGGAAAGTACCGAACATGTTCTATTTCGTAAAAGCAGAAAACCACTCGAGGAAACTGATCACCAGCGTGGTTTCTGGCATGACCGCTCTTCGTCTTCACATGTTATGTGAGTTCCGGGGACAAATGCATGTTGTTGAAGATCAAATGGGTTGTGAAATGATGCAAGTTGACAACATGGCTGTGAAGGCTATAGCTCCATACATGAAGAAGTTCATGGTCATGGTTACTTTAGCTCTTAAAATAGGAGCTCATCTTGCAGCAGGAATGGGGCAAATGATACCGGATTTGAGTAAGGAAGTAGCTCATTTGGCTGGCTCTTCAGTACTCTTCGGTGCAGCCGGGGCAACTGCAGCTGGTGTTGTAGGCGCTGCTGCTATCGGACGTAGAAACAGGTCCACGGAAGGCTCGAGGGGCATTCAACAAGACATGAAAGCAGCACAACAATGGATGGTTGATTTCTTAAGAGAAAGGAAGTGCTCCACAGGGAAGGATATCGCAGAGAAGTTCGGACTGTGGCGAGTACGGTACAGGGACAATGGTCAGATTGCATGGATCTGTAGGAGGCACATGTATGCCAGATCTGCAGAGATAATTGAAGTACCTATATGA 4146 0.4112 MSSNQNLKDLQWFLQAITMENQTLHSISFYLFQPTSHCYQETNNSININISQENHHHFSNLLTSLASSSSNNTNPTLRNLEFHRVEWESQQVKSLGTLLNNHQTIKQILFKRNRFNGRTMSDLSDILKENKVIKEIMFSESCIGSIGAGLIASSLMVNHSLEELQIWEDSIGSRGAEEISKMIEVNPSLKLLTIFDSSFITATPLISSVLARNRAMEVHVWSGERNGERSSKVVEFVPGDNTLRIYKLNLSGTCRVACSLGMNLTVKSLDMTGVKIKSKCAKEFRWVLEQNQTLKEVNFSRTCLKDKGVVYIAAGLFKNHSLQKLYLTGNLFGGIGVEHLLCPLSRFSSLQMQANVSLKCVTFGGGGTRIGRDGLAAITRFLMTNETVTRFGIHDDESLRPDDFVKIFKSLEKNASLKCLSLQGCKGVQGETLLEIIMETLQINPWIEEVDLSRTPLHNSGKTIAIYQRLGQNENPEPEIDLIKDMPMTEPKSCRVFFCGQEYAGKTALCQSISQNFSASPALPYLDQVRTIVNPVEQAVKTVGMKIKTFKDEDTKISIWNLAGQHEFFSLHDLMFPGHGSASIFIIVLSLFRKPSNREPKSTAEIEEDLQYWLRFIVSNSKRAVQQCMLPSVAVVLTHFDKINQSSQNLQQTVDSIQRLRDKFQGYVEFYPTVFTVDARSSASVSKLTHHIRKTCKTILQRVPRVYQLCNDLIQILSEWRSENYNKPAMKWKEFGDLCQVKVPYLRIRSRHYNKEAVEMKRKAIATCLHQIGEVIYFDELEFLILDCEWFCGEVLGQLLKLNVKKQHSSENNGFVSGKELEKILRGSLQSSIPGMGSKVFENLEAGDLVRMMLKLELCYEQDPSDQNSLLLIPSILEEGRGKHQRWQISSPDCLYAGRHLECDDSSHMFLTPGFFPRLQVHLHNRIKSLMNQHGATYSLEKYLISISINGIYIRVELAGQLGYYIDILACSTKNMTETLRVIQQLIIPAIQSVCHGITMTENIIRPECVRNLTPPRYRRTQFASLQQLKQALLSLPADSMYDYQHTWSSVMDSGRPILQEGFDFARDLLSDDDFREVLHRRYHDLHNLAQELQIPPENNTEGQNQAVTVSNEAEKVEPSFGGIAKGVEEVLQRLKIIEQEIRDVKQEIQGMRYYEHRLLLELHRKVNYIATFNSQVEERKVPNMFYFVKAENHSRKLITSVVSGMTALRLHMLCEFRGQMHVVEDQMGCEMMQVDNMAVKAIAPYMKKFMVMVTLALKIGAHLAAGMGQMIPDLSKEVAHLAGSSVLFGAAGATAAGVVGAAAIGRRNRSTEGSRGIQQDMKAAQQWMVDFLRERKCSTGKDIAEKFGLWRVRYRDNGQIAWICRRHMYARSAEIIEVPI 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05403 1381 Gene3D - 493 699 IPR027417 -
Vivi3g05403 1381 PANTHER PROTEIN TORNADO 1 1 1380 - -
Vivi3g05403 1381 Pfam C-terminal of Roc, COR, domain 760 929 IPR032171 -
Vivi3g05403 1381 SUPERFAMILY RNI-like 248 463 - -
Vivi3g05403 1381 Gene3D Ribonuclease Inhibitor 239 355 IPR032675 -
Vivi3g05403 1381 Gene3D Ribonuclease Inhibitor 356 477 IPR032675 -
Vivi3g05403 1381 Gene3D Ribonuclease Inhibitor 39 219 IPR032675 -
Vivi3g05403 1381 Coils Coil 643 663 - -
Vivi3g05403 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 481 687 IPR027417 -
Vivi3g05403 1381 Pfam Leucine Rich repeat 290 313 IPR001611 GO:0005515
Vivi3g05403 1381 Pfam Leucine Rich repeat 318 340 IPR001611 GO:0005515
Vivi3g05403 1381 SUPERFAMILY RNI-like 72 216 - -
Vivi3g05403 1381 SMART LRR_RI_2 319 346 - -
Vivi3g05403 1381 SMART LRR_RI_2 158 185 - -
Vivi3g05403 1381 SMART LRR_RI_2 291 318 - -
Vivi3g05403 1381 Coils Coil 1128 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05403 Vivi-Chr3 111144201 111149005 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05403 - - vvo:131662323 2634.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05403 3 111144201 111149005 Vivi3g05403 3 111144201 111149005 ECH