Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05394 ATGTCCACATCAAAAACAATCTCAGAAGCACTGAATCTCATCGACACGAAGAAACAAAATCTCAAAAAAGCCTTCGAAAATCTCCAACCCCACTGTCCCTTCCTTCATTCCCTTCCTCTTTCATGGCTCGAACTCGATTCCCACTTCACCTCTCTCCAACACTCCCTCACTAACCGCTTCCACATCCTCCAATCACTCGAACAATCACATTCAAAATCCCAATCAAAAGCCCTAACTAACTACGCTAACCCTAACAACCGAACATCCAAACACGCTAACTATCCGTCCCACCCATCTGATGCTTACGGCATTTTGTCGAACCAGAACAAATTGAACATTCTGTGTGAGAAGATGGATGGTGTCGGGTTGATGAATTACGTTATCGATAATCTCAAGGATAAAGTTAGGGTTCAGGAGGAACTGATTGAAGCATTTCGATATGCGCCGGATGTAGGGGTGTTGGTTCTGCAAATGCTGGAAAGGTTTCATGGGTTGAAATTGAATGGTGATTGTAATGATTGGAGATCGAGGAGGATGGGGAGGGTTTGTGTTATGTTGTTAAGGGTTATGAGTTTTGGTGGTGTGAATGTGAGTTATAAGGCTAGGGAGAAAGCGTTGAAGGTGGCTGTTGATTGGAAAGGGAGTTTGATGGGTGATTGTGGAAATATTTTGAAGGCGTTGGGGTTTATGTATTTGGTTTATGTGTTTGGTATTGTTTCTGAGTTTAGCATGGATGAGCTTGTTGAAATTTCTACCGTGGCTGCAGTTAATGTCGAGTTCATGCAGCTTTGTCGTGATGTTGGTTTGACAGATAGGGTTCCTGAGATTGTTCAGAAACTTGTTGATAAGGGCAAATATGTTCTGGCTGTCAAGTATGTTTTTGAGTTTAATCTTGTTGATAAGATTCCACCAGTTCCTATTTTGAAAGCGTGTGTGGATGCATCTAAGAAACTTGCTATAAGACTTTCCCAGGAAGGAAGGCCATGGATAGAAGTTACTGATAGAGAAATGCGTGTACTGAAAACGGTAATTGAGACTATTGAGAATTATAAGCTTGAATCTGAATATCCACGAGCTAGCCTGGAGCAGCGTATAGAGCAGTTGAAGGGGAAGGGTGCAAATATGAAAGACAGATCACCAGCTTCTATTCTAAATAGACATACACTACAACGACGGCAACGAAAGAGAAGAATGAAGAAGCAGCAGCAAAATGGGATCAAGCTTCCTCGAACATTCACTTCAGTTGGTCCAGAAGCTGTCCTCATGAGTGTAAGTGATAATAATTCAACAATATGCCAGTACGAACAACCTCTTGTCAGGCCCTCAGGTTTGCTTCCAAACCATCCAAATCCATACACAAGCTCACCAGCCACTCCGCTTGGCATCGTCGCCCCTACGCCAACCATGCCTTCTTACACGAGTCCTTCAGCTGGTCCCAGCGGAAACCCCAACCTAGGTGGTTCTCATCTAAACTCATCAGAGCCAAATGTGCCATCTGCTTATTATGATGGTAATAACTTTACTTACAGTGGTATGAATCTGCGACATCATTACCGAACACTTTATTATCCTCAGTAG 1578 0.4303 MSTSKTISEALNLIDTKKQNLKKAFENLQPHCPFLHSLPLSWLELDSHFTSLQHSLTNRFHILQSLEQSHSKSQSKALTNYANPNNRTSKHANYPSHPSDAYGILSNQNKLNILCEKMDGVGLMNYVIDNLKDKVRVQEELIEAFRYAPDVGVLVLQMLERFHGLKLNGDCNDWRSRRMGRVCVMLLRVMSFGGVNVSYKAREKALKVAVDWKGSLMGDCGNILKALGFMYLVYVFGIVSEFSMDELVEISTVAAVNVEFMQLCRDVGLTDRVPEIVQKLVDKGKYVLAVKYVFEFNLVDKIPPVPILKACVDASKKLAIRLSQEGRPWIEVTDREMRVLKTVIETIENYKLESEYPRASLEQRIEQLKGKGANMKDRSPASILNRHTLQRRQRKRRMKKQQQNGIKLPRTFTSVGPEAVLMSVSDNNSTICQYEQPLVRPSGLLPNHPNPYTSSPATPLGIVAPTPTMPSYTSPSAGPSGNPNLGGSHLNSSEPNVPSAYYDGNNFTYSGMNLRHHYRTLYYPQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05394 525 MobiDBLite consensus disorder prediction 73 94 - -
Vivi3g05394 525 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 108 395 - -
Vivi3g05394 525 MobiDBLite consensus disorder prediction 468 494 - -
Vivi3g05394 525 Coils Coil 358 378 - -
Vivi3g05394 525 Coils Coil 7 27 - -
Vivi3g05394 525 Pfam Frigida-like protein 107 376 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05394 Vivi-Chr3 110557100 110564979 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05394 - - mtr:11430895 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05394 3 110557100 110564979 Vivi3g05394 3 110557100 110564979 ECH
Vivi3g05394 3 110557100 110564979 Vivi7g02655 7 90403075 90406385 PCT