Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05326 ATGATTGTTCTTGTTCTAGGTCGTTCCCTCACTTCTTCTTCCTTATATAAGACTTCTCCATTCACTCAAATTCCAATCCAATTCAAACCCATTTTTCTTCTCCCCCCAAAGCTTCAATCTTTAATCCCAATTCAATCTTCTTCTTCATCCATGGCCACTTGTGTTGATTCTTCAACCCCTCCTCTTTCTCGCAAACCAAAGGTTTCCCAACCCAATGATTGTTCATTCAACTTCGTCAAATTTTGCCAACCCACTTTCTCTGATCGTGTTTCATCCATACCCATCTCAACCAATCATGAAAAAGCCACCGTTTTTGAGGATTTCGAACATGTTGTCCATGATAATGTTCAAAACGAGGTTGATGTTGTTGATGTTAATGATGTTATTGTTAATGATGTTAATGTTGATGTTAGGTTTGATGTGTGGTTGAAGATTCAAGAAGAAGCAAGGTTAGATTTAGATCAAGAACCAGTTCTATCTAGCTATTATTTCAGTTCAATTTTATCTCACAAATCATTCGAAAGCGCTTTAGCGAATCAACTCTCGATTCATTTGAGTAATTTGAGTCTTTCTAGCACGACCCTTTTCGATATTTTCAAGAGTGTTATCGTCGATGATGACGATATCGTAAGCGCTATGAAATTCGATATTGAAGCAGTAAAAGAAAGAGACCCTGCATGTATAAGCTATGTTCATTGTTTACTGAATTTCAAAGGCTTTCTTGCAATGCAAGCACATAGGGTAGCACACAAATTATGGTTACAAGGTAGAAAAGTTTTAGCTTTGTTGATTCAAAACCGAGTATCCGAGGTTTTCGCGGTTGATATTCATCCGGGTGCGAAGATCGGTAGAGGGATTTTGCTTGATCATGCAACGGGGCTCGTTGTTGGGGAGACGGCTGTGATCGGGAACAATGTTGCAATTTTGCATAATGTTACATTGGGTGGAACAGGTAAAGCTTGTGGCGATCGGCATCCGAAGATCGGAGACGGTGTTTTGATTGGTGCAGGGACGTGTGTTTTAGGGAATGTTAAGATTGGTGAAGGTGCTAAGATTGGTGCTGGGTCTGTTGTGTTGAAAGATGTCCCGGCTAGGACTACTGCTGTTGGAAATCCTGCTAAGTTGATTGGTGGAAAGGATAATCCTATCATGTTGGATAAGATTCCTAGCTTTACTATGGATCATACTTCATATATTTCTGATTGGTCTGATTATGTTATCTAG 1224 0.3962 MIVLVLGRSLTSSSLYKTSPFTQIPIQFKPIFLLPPKLQSLIPIQSSSSSMATCVDSSTPPLSRKPKVSQPNDCSFNFVKFCQPTFSDRVSSIPISTNHEKATVFEDFEHVVHDNVQNEVDVVDVNDVIVNDVNVDVRFDVWLKIQEEARLDLDQEPVLSSYYFSSILSHKSFESALANQLSIHLSNLSLSSTTLFDIFKSVIVDDDDIVSAMKFDIEAVKERDPACISYVHCLLNFKGFLAMQAHRVAHKLWLQGRKVLALLIQNRVSEVFAVDIHPGAKIGRGILLDHATGLVVGETAVIGNNVAILHNVTLGGTGKACGDRHPKIGDGVLIGAGTCVLGNVKIGEGAKIGAGSVVLKDVPARTTAVGNPAKLIGGKDNPIMLDKIPSFTMDHTSYISDWSDYVI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05326 407 Gene3D Hexapeptide repeat proteins 275 389 - -
Vivi3g05326 407 Pfam Serine acetyltransferase, N-terminal 141 245 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vivi3g05326 407 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 334 362 IPR018357 GO:0016740
Vivi3g05326 407 Pfam Bacterial transferase hexapeptide (six repeats) 325 359 IPR001451 -
Vivi3g05326 407 NCBIfam serine O-acetyltransferase 214 374 IPR005881 GO:0005737|GO:0006535|GO:0009001
Vivi3g05326 407 SUPERFAMILY Trimeric LpxA-like enzymes 140 377 IPR011004 -
Vivi3g05326 407 PANTHER SERINE ACETYLTRANSFERASE 127 407 - -
Vivi3g05326 407 SMART SATase_N_2_a 141 245 IPR010493 GO:0005737|GO:0006535|GO:0009001
Vivi3g05326 407 CDD LbH_SAT 272 372 IPR045304 -
Vivi3g05326 407 FunFam Serine acetyltransferase 275 400 - -
Vivi3g05326 407 Gene3D serine acetyltransferase, domain 1 129 274 IPR042122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05326 Vivi-Chr3 108934342 108936073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g05326 135 395 Miscellaneous Gene Families AT2G17640 54.962 4.56e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05326 K00640 - gmx:606507 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05326 3 108934342 108936073 Vivi3g05326 3 108934342 108936073 ECH
Vivi3g05326 3 108934342 108936073 Vivi7g02591 7 89765114 89766530 PCT