Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05260 ATGGGAGAGGAAGAACCAGTGACTGAAGTTGCTAAGACTGATTCAAATGGCGGTAGCGTTGCGGCCAAGACATTAGATGAAGTTGTTGCGAAGAAAGATGTGGGAACTGATGGAGGGAAAGTCTTTGAGAGTAATGGACTCAAGGGAATTGAAGAAGATAAGAAAGCGGATGATGCGGAAGAGGTAAAAGAGGTTGAGAAAGCTGATGTAGTAGAAGAAGTAAAAGAGCATAAGAAATCTGATGTAGAAGTAGAAGAGGATAAGAAAGCTGATGTAGTAGAAGAATTAAAAGAGGATAAGAAAGATAATGAGGCTGATGAAGTAAAAGAGGAGACGAAAGATGATGGGGTGGAGGAAGTAAAAGATGATAAGAAAGATGATGGGTTGGAGGAAGTAAAAGATGAGAAGAAAGAGGATAGAGCTGAGGAAGTAAAAGAGGAGAAGAAAAATGATGGGGTGGAAGAAGTGAAAGATAAGAAAAATGATACGGTTGAAGAAGAAAAGGAGGACAGGAAAGTTGATGAGGTGGGAAAAGTGAAAGATGATACGGTGGAAGAAGAAAAAGAGGATAAGAAAGTTGATGAGGTGGAAGAAGTTAAAGATGATGCGGGGGAAGAAGAAAAAGAGGATAAGAAAGTTGATGATGTGGAAGAAGTTAAAGATGAAGGGGTGGAAGAAGTAAAGGAGGATATAAAAGATGGTGCAGTGGAAGAAGTAAAGGAGGATATAAAAGATGGTGAAATGGAAGAAATAAAAGGGGATAAGGAAATCGAAGGTGCTGAGGAAATAGAGGTAGAAAAGAAAGATAGTGGAAGCGAAGATGTAAAAGAGGATATGGAAGTTGATACTGTAAAAGAAGTTGTGGAGGCTAAGAAAGATGATGATGACATTCAAGAAATAGAAGAGGATGACAAAAATGTTGCTGAATCTGAAAATGAGAAAATGGATGTTGATATTGAGGTTAAGGAAACTACAGAAGGTAAAGAAGAAAAGGAAAAAGTTGAATCTGAAAAAGAAGAAGCAGATTTGATGGAAACAGAGGGTAGCATTGAGGAAAAGGAAGAGGGCGATGGAGAGGAGAAAACCGAAGCAGAGGTAGAGGAGAAGGAAGAGGGCGATGGAGAGGAGAAAACCGAAGCAGAGATAGAAGAGAAGGAAGAGGAAGATGGAGAGGAGAAAACCGAAGCAGAGATAGAAGAGAAGGACGGGGATGATGAAAAGGAGGAATCTGAAGCAGAGACAGCGGAGAAGGAAGAGGGTGATGAAAAGGAGAAAACTGAAGCAGAGACAGAAGAGGAGGGGGAGGAGGAGGCGGAGGATGACAAGGATAGTATTGATAAATCAAAAGAAGAAGATAAGGCAGGGGGTAGTAAGGGTGAGAAAGGATCAAGAAAGCGTGTGAGAGGGAAGGTTAACGAGGAGAAAGTGAAGGAGAAAAGAAATGAACTGAAGCAACTAGAGCCTAAGACTCCTACTAGTGATCGTCCAGTTCGAGAAAGGAAATCTGTTGAAAGGTTGGTAGCAGTAATTGATAAAGACACAAGCAAAGAATTACACATTGAGAAGGGCCGTGGCACACCTTTAAAAGATATACCCAATGTGGCATATAAGTTATCTAGAAGGAAAACTGATGATAGTCTCAAGTTGCTCCATACAATCCTCTTTGGAAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGCCAATGAGGAGAAGCAAATGCTTAAAGTAAAAGAAAAGCTAGACAAATGTCATAGAGAGAAGTTACTGGAATTCTGTGATGTGTTTGACATAACACTTAGCAGCAAGTCAACAATAAAAAAGGAAGATATTATTACTAAGCTGATAGACTTTTTGCTTGCTCCTCATGCAACCACAACTGTGCTACTTGCAGAAAAAGAGTCCAATAAAAAGCGCAAGCGTGTTGTGAAACGAGGTACATCAAGGCCTAGGACTAGTACTTCAAGAGGTTCTTCTGCAAAGAGGCAGAAGAAAACTGAAAGTTCTTCAGGAGTGGAGAAAAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAGGAGAAAAATGAAGAAAATGAGGATGAAACGGACAATGAGATTCCTGAGAAATCTGAAGATGAAACTCCAGAAAAATCTGAAAGGGAAGAAAGGGAAGATAAAAGTGATTCTGGGAATGAATCTGATGATGTGAAAAAAAAGAGAAAACAGTCTAAGTCATCATCTGCTAAGAAAGAGTCCTCCGGAAGAAGCAAAATCGAGAAAACTACGGTCACAAATAAATCTCGCTCACCACCTAAGAGAGCACCTAAGAAATCATCAAATTCCCGACCAAAATCTGACGATGATGTTGTTGATGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAATGAGCAAGGGGGAAAGCAGAAGACATCAACTTCAACTCCAACTAAGTCTTCATCAAAGTCCAAAGCGAAAACGGAAAAGGTTGCTAAGGGAAAAGGCAAGAAGAAAGAGAAGTCCTCAGGTCCCAGTGATAATCAGTTGCGCGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTCACTGACATTCTGAAGTTACTTGCTAAACAATTTGATGTGGATCTCAACCCCAAAAAGGCAGCTATCAAGCTCATGATTCAGGAGGAGCTGACAAAACTAGCTGAAGAAGCAGATGATGAAGATGAGGACGAAGAGGATACCGAGAAAGACGAAGGCCGGTCTACCGGCCAGGAGTCCTAA 2796 0.4059 MGEEEPVTEVAKTDSNGGSVAAKTLDEVVAKKDVGTDGGKVFESNGLKGIEEDKKADDAEEVKEVEKADVVEEVKEHKKSDVEVEEDKKADVVEELKEDKKDNEADEVKEETKDDGVEEVKDDKKDDGLEEVKDEKKEDRAEEVKEEKKNDGVEEVKDKKNDTVEEEKEDRKVDEVGKVKDDTVEEEKEDKKVDEVEEVKDDAGEEEKEDKKVDDVEEVKDEGVEEVKEDIKDGAVEEVKEDIKDGEMEEIKGDKEIEGAEEIEVEKKDSGSEDVKEDMEVDTVKEVVEAKKDDDDIQEIEEDDKNVAESENEKMDVDIEVKETTEGKEEKEKVESEKEEADLMETEGSIEEKEEGDGEEKTEAEVEEKEEGDGEEKTEAEIEEKEEEDGEEKTEAEIEEKDGDDEKEESEAETAEKEEGDEKEKTEAETEEEGEEEAEDDKDSIDKSKEEDKAGGSKGEKGSRKRVRGKVNEEKVKEKRNELKQLEPKTPTSDRPVRERKSVERLVAVIDKDTSKELHIEKGRGTPLKDIPNVAYKLSRRKTDDSLKLLHTILFGRRGKAVQVKSNILRFSGFVWHANEEKQMLKVKEKLDKCHREKLLEFCDVFDITLSSKSTIKKEDIITKLIDFLLAPHATTTVLLAEKESNKKRKRVVKRGTSRPRTSTSRGSSAKRQKKTESSSGVEKKSTTDTEDESEGEEKNEENEDETDNEIPEKSEDETPEKSEREEREDKSDSGNESDDVKKKRKQSKSSSAKKESSGRSKIEKTTVTNKSRSPPKRAPKKSSNSRPKSDDDVVDESPKVFSRKKKNEQGGKQKTSTSTPTKSSSKSKAKTEKVAKGKGKKKEKSSGPSDNQLRDAICEILKEVDFNTATFTDILKLLAKQFDVDLNPKKAAIKLMIQEELTKLAEEADDEDEDEEDTEKDEGRSTGQES 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05260 931 MobiDBLite consensus disorder prediction 670 692 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 46 198 - -
Vivi3g05260 931 Coils Coil 902 922 - -
Vivi3g05260 931 Coils Coil 375 395 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 784 812 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 715 762 - -
Vivi3g05260 931 Coils Coil 431 451 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 264 294 - -
Vivi3g05260 931 Coils Coil 82 113 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 307 340 - -
Vivi3g05260 931 Coils Coil 327 347 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 905 921 - -
Vivi3g05260 931 Coils Coil 577 597 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 905 931 - -
Vivi3g05260 931 Coils Coil 129 170 - -
Vivi3g05260 931 FunFam DEK domain-containing chromatin associated protein 839 904 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 264 500 - -
Vivi3g05260 931 Gene3D - 839 904 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 1 234 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 693 714 - -
Vivi3g05260 931 Pfam DEK C terminal domain 849 902 IPR014876 -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 341 417 - -
Vivi3g05260 931 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 848 903 IPR014876 -
Vivi3g05260 931 Coils Coil 398 418 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 425 441 - -
Vivi3g05260 931 PANTHER DEK PROTEIN 357 919 IPR044198 GO:0003677|GO:0006325
Vivi3g05260 931 SUPERFAMILY DEK C-terminal domain 843 902 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 641 854 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 827 850 - -
Vivi3g05260 931 MobiDBLite consensus disorder prediction 442 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05260 Vivi-Chr3 106832027 106841535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05260 K17046 - gmx:100818537 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05260 3 106832027 106841535 Vivi3g05260 3 106832027 106841535 ECH