Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g05206 ATGTCGAATCCCAATCAACCCCAACCTCCCACTCCTTTCGATATGCACTCTTTCTTCAATCCCCCAAACCCTAACCTTAACCCTAGCCCTAATCCTATCATCTCTTCCCAATTCCCGCCGTCTGCTCCGTCACCGCCGCCGTCTTCTTCCTCCTCTTACCCTCCGCCCGCCGGTCCTTTCCCTCCTCAACCTTTCCCCCACCACCATAACAACCTCAACAACAACAGCAGCAACTACCCCTACGATCACCTTAACAATTTCCCAATCCACCACCGTTCCCTCTCTTTCCCTACTCCCCCTCTCCAACCTCCACCTTCCAATCCCAATCCCAACGCCGGTGCACGTCTCATGGCTCTCCTCAGCGCCCCTCCTCAACAACAACAACACCAACAACTAGTTTCCGTCTCTGTTCCATTCACTTCCGACTACGCTCCTGCTGCTAATTTACCTTCCCCTTCGCCTGCCGCCTCTATTACAGCCGCCAATGCAGCTGCGGCCGCTCTGATTCGGCTACCGAGTAGCAAGGTTCCTAAGGGAAGGCACTTGATTGGGGACCATGTTGCGTATGACGTGGATGTTAGGTTGCCTGGTGAAGTACAGCCTCAGCTTGAAGTTGCTCCGATTACTAAGTACGGGTCGGATCCTAATCCAATTCTCGGTCGACAGATTGCTGTGAATAAGTCTTATATATGTTATGGGTTGAAACAGGGGAATATTAGAGTGCTTAACATTCACACTGCAGTTAGATCTTTGCTTAGAGGCCACACTCAGAGAGTCACAGACTTGGCGTTCTTTGCTGAAGATGTTCATTTGCTGGCTAGTGTTGGCACAGATGGCTGTGTCTTTGTGTGGAAAATTTCTGAAGGTCCGGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATTGCTATTCAAATAGTAGGAGAGGAGAAAGTTGAACATCCTCAAATATGCTGGCACTGCCACAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTCTGAGAATTGACACCACCAAAATTGGAAATGGTGAAGCCTTTGTGGCAGAAGATCCCCCTAAATGTCCCCTTGACAAACTCATTGATGGGGTTCAGCTTGTAGGAACACATGATGGGGAGGTCACTGATTTGTCAATGTGCCAATGGATGACAAGTCGACTGGTATCTGCATCACAGGACGGCACGATAAAGATATGGGAAGATCGGAAGACACAACCACTTGCTATTTTGAGACCTCATGACGGGCATCCTGTTTTTTCTGCTACGTTTTTTACTGCTCCTCACCAGCCCAATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAAGTGAAACTCTGGGTCTCATCAAATGAAGAAGGTTGGCTGCTCCCAAGCAATACTGAATCTTGGAAATGTACTCAGACTTTGGAGTTGAAGAGTTCAGCTGGGCCGTCTCTTAAGGATGCATTCTTTAATCAAGTTGCAGCATTGCCTTATGCAGGTCTGCTTTTACTTGCTAATGCACAGAGGAATGCTATATATGCTGTGCACTTAGGATATGGTCCTAATCCTGAATCAACTCACATGGATTATATAGCCGAGTTTACTGTCACCATGCCTATTCTGAGTTTTACCGGAACTAGTGATATTTTGCCTCATGGCGAACATATTGTTCAGGTTTATTGTGTTCAGACACTGGCTATTCAGCAGTATGCCTTGGATTTAGCACAATGCTTGCCTCCGCCATTAGAAAATGTGGGACTAGATAGGGTAGATTCCAATGTTTCCCGAGATGCAATTATTGCTGAAGGGTTCGCCTCTTTAGACTCGTCTGCGGGTAGAACATCTGAGATGCCTTTACCCAGTTCTACTCCCAAAATAACAATGCAAGCAAGTAGCACTGAGAGTGGTCTTGTTGCAAGATACCCTTTAAGTTCGGGTCATATTGAGGCACCTGTTTCTAGAGAAATCAGCAGTTCAAATATTGAGACTAAAAATGTTCCGTTGGTTCCTTCTAGTAGTGATGCTAACATTGTTTGTGTTCCTTCTCCACCTCTTCCTTTGAGCCCAAGGTTGTCCAGGAAGCTTTCTGATTTCAGGAGTCCACAATCTAACTTGAGCGATCATGTTGGGGACCAAGCTGTTAATGATTATTCAGTTGAAAGACAAATGGATACCATTCACCGGAACTTGTCCGACCAATTGAATAGTGATTCAAAGAATGATGAAAATAAAACCAATCAGGATGACATTTCTAGTGTACTTAACCCTTCTGTCATGTTTAAGCAACCAACTCATCTGGTTACACCATCTGAGATTACAAAAGCCAGTTCCTCGTCTGAGACTAATATGATCGATAGAATGAATGAAGTAGAAAATAAGATCCAGGATGTGGGTAATGCAGAAGTAGAGGTGAAAGTGGTAGGTGAGGCAAGGCCTAATCAAAATGATGAATTTGGAAAGCAGGGGCCACAACAAAACCCAGTTTCTGATGGCAAAGAAAAATTCTTTTGCTCTCAGGCTTCTGATCTTGGCATTGAGGTGGCCCGAGAATTTAGTGCGATAGGTGGGGAAACTTACATTACAGAGGAATCCGGACAAGTTGATTCTACTGGAGGGGATTCACTGGCACAACCCTCTAATGCAGGCGAGGATGGACTTCAAGACTTGCCAAAAGATGTCCATGAAAAGGTTTCTGACTCATCTACATCAACAGTAGTACCACCCTCACCTTCTTCTAATTCAAAAGGAAAGAGACAAAAAGGTAAAAATCCTCAACCAACAGGCCCGTCTTCCCCATCTCCAAGTGTATGCAATTCAACTGATTCGTCCAATGAGCCAAATGGAATTCCAAATCTCCCATCTACTGAAAATGGTTTGCCTCAAATTGTGGCAATGCAAGATTCACTCAATCAGTTATTGACAATGCAAAAGGAGATGCAGAAACAAATGACAATGATGGTTGCAGTTCCAGTTACCAAAGAGGGTAGAAGGCTTGAAGCAGCCCTAGGGAGAAGCATGGAAAAAGCTGTTAAGTCCAATGCTGATGCTTTGTGGGCTAGAATTCAAGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATTCAACATGTTACAGGTTTGATTACTAACTTTACGAACAAGGATCTACCAGCAATAGTGGAGAAAACTGTAAAGAAGGAAATGGCTTCAGTTGGGCAAGCTGTAATTCGTTCAATGTCTCCTACTATTGAGAAAATAATATCCTCTACTATTGTGGAATCCTTCCAGAGAGGAGTGGGCGACAAGGCAGTGAATCAACTTGATAAATCAGTTAATTCAAAACTCGAAACTACTGTAGCTAGGCAGATCCAAGCACAGTTTCAGACAACTGCCAAACAAGCGCTTCAGGATGCACTGAAATCTAGTTTTGAAACATCGGTGGTTCCTGCATTTGAGATCTCCTGTAAAACCATGTTTGAGCAAGTGGATGCTACATTCCAGAAAGGCATGGCTGAACATTCAAATGCAGTGCAGCAACGACTTGAATCTGGGCCTACTTCATTGGCAATGACTCTAAGGGATTCCATTAATTCAGCCTCATCAGTTACTCAAACCCTGACCAGAGAAGTGCTCGAGGGTCAGAGAAAGCTAATGTCACTTGCAACCTCAAGAACAAACTCAGGCACATTGAGTACTCTGCCCATCCAACTGAACAATGGTCCATTACTTCCTGAAAAGGTTGAGGCACCTCTAGACCCCACAAAGGAGCTAGGAAGGTTGATTTCTGAACGGAAATTTGAGGAGGCATTTATCGCAGCATTGCATAGAAGTGATGTATCTATTGTATCTTGGTTATGCTCTCAGGTTGATTTACATAGACTTTTGACAATGGTTCCTCTTCCCTTAAGCCAAGGTGTAGTGCTTTCTCTTTTGCAGCAGTTGGCGTGTGATATTAACAACGACATGTCCCGAAAGATCGCATGGATGACAGATGTGGCTACTGCCATTAATCCCTCGGATCCCATGATAACAATGCATGTCCGGCCCATATTCGAACAAGTCTATCAAATACTGAATCATCAACGTAGCTTGCCTACAATCTCCGGTGCTGATCTTTCAAGTACCCGCCTTTTATTGCATGTCATCAACTCCATGCTTACGACATGTAAATGA 4158 0.443 MSNPNQPQPPTPFDMHSFFNPPNPNLNPSPNPIISSQFPPSAPSPPPSSSSSYPPPAGPFPPQPFPHHHNNLNNNSSNYPYDHLNNFPIHHRSLSFPTPPLQPPPSNPNPNAGARLMALLSAPPQQQQHQQLVSVSVPFTSDYAPAANLPSPSPAASITAANAAAAALIRLPSSKVPKGRHLIGDHVAYDVDVRLPGEVQPQLEVAPITKYGSDPNPILGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGCVFVWKISEGPDDEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKIGNGEAFVAEDPPKCPLDKLIDGVQLVGTHDGEVTDLSMCQWMTSRLVSASQDGTIKIWEDRKTQPLAILRPHDGHPVFSATFFTAPHQPNHIVLITAGPQNREVKLWVSSNEEGWLLPSNTESWKCTQTLELKSSAGPSLKDAFFNQVAALPYAGLLLLANAQRNAIYAVHLGYGPNPESTHMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTLAIQQYALDLAQCLPPPLENVGLDRVDSNVSRDAIIAEGFASLDSSAGRTSEMPLPSSTPKITMQASSTESGLVARYPLSSGHIEAPVSREISSSNIETKNVPLVPSSSDANIVCVPSPPLPLSPRLSRKLSDFRSPQSNLSDHVGDQAVNDYSVERQMDTIHRNLSDQLNSDSKNDENKTNQDDISSVLNPSVMFKQPTHLVTPSEITKASSSSETNMIDRMNEVENKIQDVGNAEVEVKVVGEARPNQNDEFGKQGPQQNPVSDGKEKFFCSQASDLGIEVAREFSAIGGETYITEESGQVDSTGGDSLAQPSNAGEDGLQDLPKDVHEKVSDSSTSTVVPPSPSSNSKGKRQKGKNPQPTGPSSPSPSVCNSTDSSNEPNGIPNLPSTENGLPQIVAMQDSLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRSMEKAVKSNADALWARIQEENAKNEKLLRDRIQHVTGLITNFTNKDLPAIVEKTVKKEMASVGQAVIRSMSPTIEKIISSTIVESFQRGVGDKAVNQLDKSVNSKLETTVARQIQAQFQTTAKQALQDALKSSFETSVVPAFEISCKTMFEQVDATFQKGMAEHSNAVQQRLESGPTSLAMTLRDSINSASSVTQTLTREVLEGQRKLMSLATSRTNSGTLSTLPIQLNNGPLLPEKVEAPLDPTKELGRLISERKFEEAFIAALHRSDVSIVSWLCSQVDLHRLLTMVPLPLSQGVVLSLLQQLACDINNDMSRKIAWMTDVATAINPSDPMITMHVRPIFEQVYQILNHQRSLPTISGADLSSTRLLLHVINSMLTTCK 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 862 881 - -
Vivi3g05206 1385 SUPERFAMILY WD40 repeat-like 218 506 IPR036322 GO:0005515
Vivi3g05206 1385 SMART WD40_4 367 404 IPR001680 GO:0005515
Vivi3g05206 1385 SMART WD40_4 407 453 IPR001680 GO:0005515
Vivi3g05206 1385 SMART WD40_4 245 285 IPR001680 GO:0005515
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 899 958 - -
Vivi3g05206 1385 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 205 517 IPR032401 -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 810 832 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 859 958 - -
Vivi3g05206 1385 FunFam Enhancer of mRNA-decapping protein 4 1297 1383 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 1 66 - -
Vivi3g05206 1385 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 294 IPR001680 GO:0005515
Vivi3g05206 1385 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 23 1383 IPR045152 GO:0031087
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 747 781 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 684 711 - -
Vivi3g05206 1385 FunFam enhancer of mRNA-decapping protein 4 204 518 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 67 83 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 817 832 - -
Vivi3g05206 1385 Gene3D - 209 551 IPR015943 GO:0005515
Vivi3g05206 1385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 252 289 - -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 695 711 - -
Vivi3g05206 1385 Gene3D - 1297 1385 IPR044938 -
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 1 114 - -
Vivi3g05206 1385 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 413 IPR001680 GO:0005515
Vivi3g05206 1385 MobiDBLite consensus disorder prediction 731 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g05206 Vivi-Chr3 104662938 104672673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g05206 K12616 - gmx:100798228 2015.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g05206 3 104662938 104672673 Vivi3g05206 3 104662938 104672673 ECH