Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04933 ATGGCGTCGTCGTCGTGGTGCTTCTCTCCCGTCACCGTAACCACCACCGCCACTACCCGCCGCTACTCTTTAACCTCTCAAACTCCTAAATTTCTCATCAACCAACTCCCTTCTTCTTCTCGCTTTTCCACCACTCCATCTTCCCTTCGATTTAGGGTTCCATGCTCCAACAAAACCGATAAATCAACGGAATCCACCGAACTTGATGTTCTAGATTGCGTGGAAACAGGGCAAGACGTGGAGTGCTTATTAACTGAAGAAGAAGAAAATGGAAAAGTAGAGAAAAAAGATGAATCATCAAAGAAGATGCTTTGTCTAGCGGAAGGGTTATGGGAAGGTGCTGTTTTAATATCGCCGTTTTTCTTCTGGGGGACTGCCATGGTGGCGATGAAGGAAGTGCTTCCTAAATATGGTCCTTTCTTCGTTTCGTCTTTTCGTCTCATTCCAGCTGGGTTCCTTCTCGTTGCTTTCGCTGCTTCCAGAGGAAGACCTTTCCCCTCTGGCCTCAATGCATGGCTTTCCATTTCGCTCTTCGCCATTATTGATGCTGCTTGCTTTCAGGGTTTTCTCGCAGAAGGGTTGCAGAAGACTTCAGCTGGTTTGGGAAGTGTTATTATTGATTCACAACCTTTGACAGTGGCTGTACTTGCAGCTTTGTTATTTGGCGAGTCCATAGGAATTATCGGAGCTGCTGGGCTTGTACTTGGTGTCGTAGGACTTGTGTTACTAGAGTTACCTGCCCTATCATTTGATGGGACTGGGAGCAACTTCTCACTGTGGGGAAGTGGGGAGTTATGGATGCTTCTTGCAGCTCAGAGCATGGCAGTTGGCACTGTTATGGTTCGTTGGGTCTCCAAGTACTCTGATCCTATCATGGCAACTGGATGGCATATGGTTATTGGCGGTCTCCCCCTTGTGGCATTCGCAATTCTTAATAATGAGCCTGCTGTAAGTGGGATTCTTGAAGAGTACAGTTCAAGTGATATATTGTCACTCCTCTACACATCCATTTTTGGAAGCGCTGTTAGCTATGGTGTGTTCTTTTACAGTGCAACTAAAGGTAGCTTGACCAAGCTCAGTTCTCTTACATTTCTAACCCCAATGTTTGCCTCAATTTTCGGGTTTCTGTATCTTGGTGAGACCTTCTCACCTGTACAGCTTATTGGGGCCAGTGTAACTGTAGCTGCAATATACATGGTTAACTTCAGAAACTCCTTAGAATGA 1224 0.4592 MASSSWCFSPVTVTTTATTRRYSLTSQTPKFLINQLPSSSRFSTTPSSLRFRVPCSNKTDKSTESTELDVLDCVETGQDVECLLTEEEENGKVEKKDESSKKMLCLAEGLWEGAVLISPFFFWGTAMVAMKEVLPKYGPFFVSSFRLIPAGFLLVAFAASRGRPFPSGLNAWLSISLFAIIDAACFQGFLAEGLQKTSAGLGSVIIDSQPLTVAVLAALLFGESIGIIGAAGLVLGVVGLVLLELPALSFDGTGSNFSLWGSGELWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVAFAILNNEPAVSGILEEYSSSDILSLLYTSIFGSAVSYGVFFYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLIGASVTVAAIYMVNFRNSLE 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04933 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 296 404 - -
Vivi3g04933 407 Pfam EamA-like transporter family 116 243 IPR000620 GO:0016020
Vivi3g04933 407 Pfam EamA-like transporter family 262 402 IPR000620 GO:0016020
Vivi3g04933 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 246 - -
Vivi3g04933 407 PANTHER INNER MEMBRANE TRANSPORTER 96 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04933 Vivi-Chr3 94393495 94397450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04933 - - gmx:100783291 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04933 3 94393495 94397450 Vivi3g04933 3 94393495 94397450 ECH