Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04593 ATGCAAGGGAAAGCTAAGGCTATGGCCATGGCATCAACAAATAGCATCATCTCCATTTCCTCTGCTTCATTGTTGAATCGAACTCCTCAACCAAAAGCAACAACACTAATTAGCCTCCTGAAGCACAACAAAGATCATGAACAACGTTGTACTTCAAAATCCTCTTTCACCTTCACTGCTCTTAAGATATCAACTCCAAAAACCAGAAGAAGCAAGTTGATTTGCTCAGCCTCAGCTTCAGAAGCTTCAACGCTTCCCGCTGCTCTTCTTTTTGACTGTGATGGAGTTCTTGTTGACACTGAAAAAGACGGCCACCGCATTTCTTTCAATGATACCTTCCAAGAGAAAGAACTAGGCGTTACATGGGACGTGGAATTGTATGGTGAATTGCTCAAAATCGGAGGTGGAAAAGAAAGGATGACGGCGTACTTTAATAAGACAGGTTGGCCTGCGAACGCCCCAACAGGCGAACAAGAAAGGAAAGATTTCATTGCTTCACTTCACAAGCGAAAGACAGAATTATTCATGGTGCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAACTCAAGGAGTCAATGTTGCAGTTTGCAGCACTTCGAACGAGAAAGCGGTCTCTGCAATAGTATCATTTTTACTTGGACCTGAGCGAGCAGAAAAAATCCCGATATTTGCAGGAGATGTGGTTCCCCGCAAAAAGCCTGATCCGGCCATCTATCTACTAGCAGCCAGCACTCTGGGCGTCGAACCTTCAAGATGTGTTGTGGTCGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGGAGCTGGGATGAAGTGTATAGTAACAAAGAGCGGATATACAGCAGATGAAGATTTCCTGAATGCAGATGCTGTATTTGACTTCATTGGTGATCCTCCTGAGGAGAGATTCGATTTAGCATTTTGTGGTAGCCTTCTTGAGAAGCAATATGTGAGCTAG 990 0.4434 MQGKAKAMAMASTNSIISISSASLLNRTPQPKATTLISLLKHNKDHEQRCTSKSSFTFTALKISTPKTRRSKLICSASASEASTLPAALLFDCDGVLVDTEKDGHRISFNDTFQEKELGVTWDVELYGELLKIGGGKERMTAYFNKTGWPANAPTGEQERKDFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIPIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKGAGMKCIVTKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGSLLEKQYVS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04593 329 SFLD phosphoglycolate phosphatase 84 312 - -
Vivi3g04593 329 CDD HAD_CbbY-like 88 288 - -
Vivi3g04593 329 Gene3D Putative phosphatase; domain 2 100 184 IPR023198 -
Vivi3g04593 329 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 49 326 IPR044999 GO:0016787
Vivi3g04593 329 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 84 312 - -
Vivi3g04593 329 FunFam HAD family hydrolase 179 302 - -
Vivi3g04593 329 SUPERFAMILY HAD-like 88 305 IPR036412 -
Vivi3g04593 329 NCBIfam HAD-IA family hydrolase 169 285 IPR006439 -
Vivi3g04593 329 Gene3D - 88 304 IPR023214 -
Vivi3g04593 329 Pfam Haloacid dehalogenase-like hydrolase 89 285 IPR041492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04593 Vivi-Chr3 83227269 83229550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04593 - - gmx:100816266 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04593 3 83227269 83229550 Vivi3g04593 3 83227269 83229550 ECH