Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04577 ATGAATTCTGGGAATAAAAAAAGAGAAATTGTCTTGGGATGTGTATCCAAGTTAGTTTATTCTCGCCGGAGAAACAAAAAAGAGCCCATAAAAGATGTCATACAAATTGACTCCCAAGTCGATTTTGCGAATCAGGAAGGAGAAATTGACTCAAGACACGGAGATGCAATAGGAAGTGTTGTTGATTCAATTTTTCCGTTTAATTCAAAGATTATTCCTCGGCGAGCGCGAACAAAATGCAAGCGGAAATTCAAAGGCAGTAAAGCTCTCTCTAGATCCAAGGAAAAGCTTGACAGTCAAGTCTTTGAAAATTACTTAGCGAAAATATGGAAGAGTTTCTCAGAAGATAGGAAAATGTCATTCGCATATTTGGACAGTTTATGGTTTAGCCTTTACAGGAATCCTTCATCTAAAGATAAGGTGCTGAGTTGGATTAATAAAGAACGTATTTTCACAAAGGCGTATGTTTTTGTGCCTATAGTCTGCTGGGGTCATTGGAACCTCTTGATCTTCTGCCATTTTGGTGAGAACTTGGGGTCCGTTGCCGAATCACGTTGTATGTTGTTACTCGATTCTCTTGAAATGGCCAATCCAAGACGACTTGAACCAGAGATAAGAAGATTTGTACAAGACATTTATAAAGCAGGGGACAGGCCAGAGACTAAGCATCTAATATCTAAAATCCCATTATTAGTGCCCAAGGTGCCACAACAAAAAGACGGTACTGAATGTGGGAACTTCGTCCTTTATTTCATTAAATTGTTTTTGGAGCTCGCACCTGATCATTTTAGCATGGACGGGTACCCTTACTTTATGAAAAAAGATTGGTTTACATTTGAAGAGTTGGATCGGTTTTGTGAGAGCTTGACCCATTGA 876 0.3904 MNSGNKKREIVLGCVSKLVYSRRRNKKEPIKDVIQIDSQVDFANQEGEIDSRHGDAIGSVVDSIFPFNSKIIPRRARTKCKRKFKGSKALSRSKEKLDSQVFENYLAKIWKSFSEDRKMSFAYLDSLWFSLYRNPSSKDKVLSWINKERIFTKAYVFVPIVCWGHWNLLIFCHFGENLGSVAESRCMLLLDSLEMANPRRLEPEIRRFVQDIYKAGDRPETKHLISKIPLLVPKVPQQKDGTECGNFVLYFIKLFLELAPDHFSMDGYPYFMKKDWFTFEELDRFCESLTH 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04577 291 ProSiteProfiles Ubiquitin-like protease family profile. 80 255 IPR003653 GO:0006508|GO:0008234
Vivi3g04577 291 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 90 288 - -
Vivi3g04577 291 SUPERFAMILY Cysteine proteinases 92 270 IPR038765 -
Vivi3g04577 291 Pfam Ulp1 protease family, C-terminal catalytic domain 140 276 IPR003653 GO:0006508|GO:0008234
Vivi3g04577 291 Gene3D Adenoviral Proteinase; Chain A 71 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04577 Vivi-Chr3 82937079 82939498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04577 - - cam:101493534 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04577 3 82937079 82939498 Vivi3g04577 3 82937079 82939498 ECH