Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04574 ATGGCCACCGCAGCTTTCAAATCCACCACCAAGAGAATCCCCGTCGGAGCTTCCTCCGGCGACGACTCCCGCGCCTCTTCCTCCTCCCTCCACCACCGCCGCTCTCGGAGCCTCAGTCGACCTGCTCGTCCTCCCTCCTCACGCGATTCCGACTCTGATCTCGCCGCTCCTAGAGGCAAGTTCGTTAACACTGTTAGAGGCTCTGGCTTCCCGGAGATTAGCCTTGACGATCTCGCTATTGAGTTTTTTGATTCTGCGAACCGAGGTCGCGTTAATTCTAGAAGCTCGGAGTCGGAGACGTCGTCGTCGGTGAGAAGAGGGAGGTCTGTTTCGAGGAGGAGCTCCGGTGTTGGGGAGGATAGAAGGAGTAGTATTGGTGGCGGAGGAAAAACGAGCTCCGATGCTAGTTCGAGAAGAAGGAGATCGGTTTCAGTTGTTAGGTGTCAAATTAGTGATTCTGAGAGTGACCTGGATCGTTCTCAGAATTCTAAAAGTCGGGCAAATTTGAAAAATATTGATATTGGGAACAAGGTAATGCATAAGCCAGTTGCTTCGGATCAAAGACAAGTGCTGAAAAAGTCCCTTAGTCAGAAAGATTTGAGATCATATGATGGCTACTCTAGTCATTCTTCAGTTCTCACTGATGACGAAGGAGCAAGTGCCCACTTCAAAAAAAGTGGAAGTGAGAAACTACGAGCAGTTCATTCACATAAGAAGGCGGCGGGGAAATCAAGGGCCTCCCCGTTGTCCATGAGTGATAGGTTGCTGTCAGATAATTCTGATGCTGTTCAGGCGGTTTCTTCGGTCAGAAGGAGCTATGAATCTGAATTGGAACAGTCAGAGAAAAGAAAACAAGATTTGTTAGCTGAGATTGTGTTTGAGGAGCAGCGAGGCAGACAACTTTCCAAGATCGTTAATGAATTGAGTCCTCCTAAAAAGAGCAATTCTATAGCAGAACCACCAAGAGTCAGGAAGAAAAGTAATGACAGAAACAGAATGTCTATGCGGTTAACTGAGGAGGCTGAGAGATATATCGAGGATTTCATTTCAAATGTTGAAGATACGGATATTTCCTCACTTGATGGAGAAAGGAGTGACACAAGCTCTTCCATTGGAGGATTGATAAAACCAGAAACATTTTACAGTCCACCATTGCCTAGACCTCTTCCTGTTTTGATGGATGGGGTGACATTACCATGGTTGCAATGGGAAACAATTAACGATGCTACACCTAGGACAACCCTGAATAAGGCACTTTTAACATTGACTCCGAATACTGCAACTGCAAGTTCCACTCAGGATAATTCGAAAGATCAAAGTAACCAATCTATCAGCAGTCGTGGGAGCTGGAGCCCTGATTACCTTAAGGACTATATCGGAAAGGATGTATACAGTAAACTTGGAAAAGTTTATAGTAATCCAGACCAGTCATCCTTAGCTGAATCAAAAGGATTGAGATATGATATCGATGAGTATCTCAAAGTTAAAAGCAGTGAAGATTTTCTGACTGAAAGACTGAAGCAACAGCAAAGAATTAATTCAGGCTGTCTCCTGTTATGTAACATAAGATTATTTTAG 1578 0.4493 MATAAFKSTTKRIPVGASSGDDSRASSSSLHHRRSRSLSRPARPPSSRDSDSDLAAPRGKFVNTVRGSGFPEISLDDLAIEFFDSANRGRVNSRSSESETSSSVRRGRSVSRRSSGVGEDRRSSIGGGGKTSSDASSRRRRSVSVVRCQISDSESDLDRSQNSKSRANLKNIDIGNKVMHKPVASDQRQVLKKSLSQKDLRSYDGYSSHSSVLTDDEGASAHFKKSGSEKLRAVHSHKKAAGKSRASPLSMSDRLLSDNSDAVQAVSSVRRSYESELEQSEKRKQDLLAEIVFEEQRGRQLSKIVNELSPPKKSNSIAEPPRVRKKSNDRNRMSMRLTEEAERYIEDFISNVEDTDISSLDGERSDTSSSIGGLIKPETFYSPPLPRPLPVLMDGVTLPWLQWETINDATPRTTLNKALLTLTPNTATASSTQDNSKDQSNQSISSRGSWSPDYLKDYIGKDVYSKLGKVYSNPDQSSLAESKGLRYDIDEYLKVKSSEDFLTERLKQQQRINSGCLLLCNIRLF 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04574 525 Coils Coil 263 297 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 426 448 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 1 70 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 88 110 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 200 215 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 303 330 - -
Vivi3g04574 525 PANTHER OS11G0129800 PROTEIN 240 524 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 86 261 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g04574 525 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04574 Vivi-Chr3 82910625 82916544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04574 - - gmx:100805104 633.639