Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04573 ATGCAAGTCTTCCCCAATTCTTATCTCTTCACTTTTCCTAAACCCTTAAACCCTCCCTCTCCCCTTTTCCACTTCCACCGTCGTCCTCCGCCTCTACTCCTCCGAAAACCACCACCCACCACCGTCGCAAAGTCCTTCACCTCCGATGAGTTCCCCGTCGACGAGACCTTCCTCCAGGCTCTCGGCCCCCAAAACAAGGAAACCGAGGATGAAGCTCGACGGCGCAACTGGATCGAACGCGGCTGGGCTCCCTGGGAAGAAATCCTCACTCCCGAAGCCGAATTCGCGCGTCATTCTCTCAACGAAGGTGAGGAGGTTCCTCTCAAATCGCCGGAGTCCATCGAAGCGTTCAAAATGTTGAACCCTAGGTACCGGAAGAAGAGGATTGAGGAAATGGGATTGACGGAAGAGGAGTATTTGGAGAAGCAGTTTGAAATCAAGACAGAGATTCCCGAGCCGTTGGTGACCAAGTGGGCGGGACCGCTGGTGGTAAGGTTAGTGCCGCCGCGTGATTGGCCTCCCCGAGGGTGGGAGGTGGATCGGAAGGAACTCGAGTTTATTCGAGAAGCGCATAAGATGCAGGCCAAGAGGGTGAGGTTGGAGGATATTGAAAATGGAGTTAAAACTGAGACTGATGATGTGTGTTTGGATCGGTATAAGGTGTTTCTGAAGCAATACAAAGAGTGGGTGGAAGCTAACAAGGATTTGTTGGAAGAGGAATCTTATAAGTTAGACCAAGATTATCACCCTGGTAGGAGGAAAAGAGGCAAGGACTACAAGGACGGCATGTACGAGTTACCATTCTATTATCCTGGTCAGATTTGTGTGGGGAAGGTGACAACTTTGCATCTCTATCAAGGGGCATTTATTGACATTGGCGGGGTATACGATGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCATATAAATGTGGGTATGACCGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGGTTCCCAATTGAACTTCGTTTTGTCGATCCAAATATAGATCATCTAATCTTTAACAGATTTGAGTTCCCACCAATATTTCACCGCGAGGAAGATACTAATCCAGATGAAATGCGGCGTGACTGTGGAAGACCTCCTCTTCCTAGAAAAGATCCAGGAGACAAGCCAGAGGAAGAACCTCTATTTTCTAATCACCCATACGTTGATAAGTTGTGGCAGATCAATGTAGCTGAGCAAATGATTTTGAATGATATGGATATTAATCCTGATAAATATAAAGGCAAAAAGTTGTCAGACTTGGTTGACGAAGATGATTTTGATGAAGAAAAATCCGTCCAGCATACAAAAGTTCACTATAAGAATGCATTAGTGCCAAAAGTAACTTTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCATTTGCTGAGCGTGAGCACCATAAGAAACTATGGAAGGAAGCAAAGGACAGAGGTGAGGACTACAAAATTACCTCATTGAAGCGCAATACTGAGATGGATGAATATGATTTTATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGATTAGAGACATCAGCTGTCGCAAAACTCTTGGATTACCATTGGAAGAGCCAGGAAGGTATGTGGATGCTAGTTTTTTCGGTAAAGACCAGTATGATCCTGAAAGTCCTCTATATCGCTATGACTACTGGGGAGAACCCAAGAATTCAGAAAAGAGCAGAAAAGAGAGGATGACAGATACTCATAACAAATCAATTGTGGGCAAGAGCACTGTTTGGTGTGAAATGCCGTATGAAGATACCATCAAGGATCAGAGCAAAGAATTCATTAAGTATACAGAGCAAGATGAAGAAGAGGATGATGATGACGATGATGATTTTGATTTTAGTATTCTGAGGAATCTTGGCAATAATGATGCCGCAGATCAAATTCGTGTTAATGGAACCGAGACTTCTACATTGTCAGATGAAGGCGTGTTTGAGGAATGA 1998 0.4464 MQVFPNSYLFTFPKPLNPPSPLFHFHRRPPPLLLRKPPPTTVAKSFTSDEFPVDETFLQALGPQNKETEDEARRRNWIERGWAPWEEILTPEAEFARHSLNEGEEVPLKSPESIEAFKMLNPRYRKKRIEEMGLTEEEYLEKQFEIKTEIPEPLVTKWAGPLVVRLVPPRDWPPRGWEVDRKELEFIREAHKMQAKRVRLEDIENGVKTETDDVCLDRYKVFLKQYKEWVEANKDLLEEESYKLDQDYHPGRRKRGKDYKDGMYELPFYYPGQICVGKVTTLHLYQGAFIDIGGVYDGWVPIKNNDWFWIRHHINVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFEFPPIFHREEDTNPDEMRRDCGRPPLPRKDPGDKPEEEPLFSNHPYVDKLWQINVAEQMILNDMDINPDKYKGKKLSDLVDEDDFDEEKSVQHTKVHYKNALVPKVTLKTSVKELDLEAAFAEREHHKKLWKEAKDRGEDYKITSLKRNTEMDEYDFMHWRRSFEEREALIRDISCRKTLGLPLEEPGRYVDASFFGKDQYDPESPLYRYDYWGEPKNSEKSRKERMTDTHNKSIVGKSTVWCEMPYEDTIKDQSKEFIKYTEQDEEEDDDDDDDFDFSILRNLGNNDAADQIRVNGTETSTLSDEGVFEE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04573 665 Coils Coil 459 479 - -
Vivi3g04573 665 MobiDBLite consensus disorder prediction 365 395 - -
Vivi3g04573 665 MobiDBLite consensus disorder prediction 614 665 - -
Vivi3g04573 665 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 42 650 IPR044967 GO:0000427|GO:0003723
Vivi3g04573 665 MobiDBLite consensus disorder prediction 617 631 - -
Vivi3g04573 665 MobiDBLite consensus disorder prediction 639 658 - -
Vivi3g04573 665 ProSiteProfiles S1 domain profile. 272 340 IPR003029 GO:0003676
Vivi3g04573 665 SUPERFAMILY Nucleic acid-binding proteins 268 327 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04573 - - gmx:100783002 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04573 3 82893665 82902728 Vivi3g04573 3 82893665 82902728 ECH