Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04572 ATGGCACCAACTGTTCCCATAGATTTTGCTGGGCAAAAGGAATCCAGAAAATATTCTCATTCACAAAACATGGGGAAATCTAGAAAATATTCCAAAGGTCATGCTACTGGGTTTGTTCCTGAGTTTCGTCATGTTGTAGAGACTATGGGTGAATCGGATGGGTTGGGTAGCTCGGGAAGGGTTGAGATGGAGCCGGCGGCGTCGGCAGATTCGTATGCGCCGAATAGGAAATGCGCTGGTTTGAAAAGTGATAGTTGTTATGGTAGTTTTGATGTACCTTATCAACTGTTTTCGTTGCCTAAAATGTCGGCTATGGAAAGAAGGGATTTGAAATTGAGGTTAACTTGGGAGCTTGAACAAGTGAGGAAACTTCAGAAGAAAATTGATGGTATGAGTAATTCAACCATTATTGGATTATCTCCGTCCAGTGATATAAGGAGCTGCAGTGTGGGACAGAAAAGGCCTCAGCTGGAGAGTCAATACAATATACTGCAAGCATCAGTGCCACATAGTAAGAAAAGACCTTTGCCAGGACGTAGTGGTCCCAAGACAAAAAAAAGTATGTCTGGGCGTTTTGAATATCCGAAACCTGCTGCACCAATGGATTCATATGAATCATTGATGAAACAGTGCGAGAATTTACTTAACCGTTTGATGTCGCATCAATATGGTTGGGTCTTTAATAAACCAGTTGATCCTGTTGCATTGAACATTCCCGATTATTTCAATGTCATCAAACATCCAATGGATTTGGGAACTGTGAAGAGTAGACTTACATCTGGTAAATATTCAAATCCCATGGATTTTGCTGCTGATGTGAAGCTGACATTCTCAAACGCATTGACTTATAATCCACCTGGCAATGATGTGCACGGCATGGCAACTACTCTTAATAAAGCCTTTCAAACAAAATGGAAGTCCATCGAGAAGAAAATTCCTGTCATTGGTCATCATGTCTCATCCGAGCTTTCAAAACATACACACATTGAAACTGAAATTTATGACCCAATCCCCCCCATAAAAAAGAAGAAAATGACACCAAATAATACTAATACCAAGCCAGAACCTGTCAAAAGAATCATGAGTGACATGGAGAAGCAGAAATTGAGTCAAGAGTTGGAGGAGATGCTTGCAGAGTTGCCTGAAACCATTTTGGATTTTTTGAAAGAGCAGAGTCACAATGCAGGGCAAACCAATGATGATGAAATTGAGATTGATATTGATACTCTTAGTGATGATACCTTATTCAAACTGCGGAAGCTTCTTGATGATTTTATGCTGGAGAAGCAACGATTCCAGCCAAAAACTGGACAGTGTGAAATGGAGCTTCGTAATGAATCTGGGTTTAGCAATTCATCAATGCAACCTTCTAAAGGCAACGAACTGGTTGAGGAGGATGTTGACATTATTGGTGGGAATGATCCTCTTAATTCAAATTATCCTCCACTAGAGATTGAGAAAGATGGAGCCAACAGAAACAGTAAATGCAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCTCATCATCCAGTGATTCAGATTCAAGTAGTTCATCTGGTAGTGAGTTAGATACAGCTAAAGCGTCAGAACCTCTTAGTTCTAAGGAAAATATAGGTCCTGGCTTGACTTATGATCAAAACAGGGGAGATCCTGGTAATCCAGCAACTGGAAATGATTCAACTAACCTGGGTAGCCAGGTTGACCAGAGTCTGGAGACTAAGACTATTACTATTGAATCAGAAAGCCACCAAGATGGGGAGAGTGCTGCGTCTAAGAGGCAAGTCTCTCCAGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGGTTTGCTGACACCATATTCAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGATAAACGTGACCCTGAAAAGCTTAGGATAGAGCGGGAAGAGCTTGAGAGAAGGCAGAAAGAAGAGAAAGCTCGGCTCCAAGCAGAGGCAAAAGCTGCAGAAGAGGCTCGGAGGAAAGCTGAAGCAGAAGCTGAAGCTGAAGCCAAAAGGAAGAGGGAACTGGAGAGAGAAGCAGCCCGCCAAGCTTTGCAAAAGATGGAGAAAACTGTTGACATCAATGAGAGCTGTCAATTTTTGGAAGATCTAGAGATGCTGAGTGCTGTACATGATGAAAATACACCAAGTTTCAAAGAGGAAGCGAGCCCAGATGATCATCAAAATGGATTTGGGGGGATCAGGCTGCAGGGAAATCCCTTAGAGCAGTTAGGATTGTACATGAAGGTTGATGATGAAGATGAGGAGGAAGAACTGCCTCAGAGTGCTGCAGAGCCATCAAAAGATGTAGAAGAAGGAGAAATTGATTGA 2340 0.4222 MAPTVPIDFAGQKESRKYSHSQNMGKSRKYSKGHATGFVPEFRHVVETMGESDGLGSSGRVEMEPAASADSYAPNRKCAGLKSDSCYGSFDVPYQLFSLPKMSAMERRDLKLRLTWELEQVRKLQKKIDGMSNSTIIGLSPSSDIRSCSVGQKRPQLESQYNILQASVPHSKKRPLPGRSGPKTKKSMSGRFEYPKPAAPMDSYESLMKQCENLLNRLMSHQYGWVFNKPVDPVALNIPDYFNVIKHPMDLGTVKSRLTSGKYSNPMDFAADVKLTFSNALTYNPPGNDVHGMATTLNKAFQTKWKSIEKKIPVIGHHVSSELSKHTHIETEIYDPIPPIKKKKMTPNNTNTKPEPVKRIMSDMEKQKLSQELEEMLAELPETILDFLKEQSHNAGQTNDDEIEIDIDTLSDDTLFKLRKLLDDFMLEKQRFQPKTGQCEMELRNESGFSNSSMQPSKGNELVEEDVDIIGGNDPLNSNYPPLEIEKDGANRNSKCSSSSSSSSESGSSSSDSDSSSSSGSELDTAKASEPLSSKENIGPGLTYDQNRGDPGNPATGNDSTNLGSQVDQSLETKTITIESESHQDGESAASKRQVSPEKLYRAALLRSRFADTIFKAQEKALEKDDKRDPEKLRIEREELERRQKEEKARLQAEAKAAEEARRKAEAEAEAEAKRKRELEREAARQALQKMEKTVDINESCQFLEDLEMLSAVHDENTPSFKEEASPDDHQNGFGGIRLQGNPLEQLGLYMKVDDEDEEEELPQSAAEPSKDVEEGEID 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04572 779 MobiDBLite consensus disorder prediction 469 597 - -
Vivi3g04572 779 ProSiteProfiles NET domain profile. 351 433 IPR027353 -
Vivi3g04572 779 Coils Coil 635 694 - -
Vivi3g04572 779 Pfam Bromodomain extra-terminal - transcription regulation 361 423 IPR027353 -
Vivi3g04572 779 Pfam Bromodomain 211 295 IPR001487 GO:0005515
Vivi3g04572 779 MobiDBLite consensus disorder prediction 621 695 - -
Vivi3g04572 779 CDD Bromo_plant1 207 305 IPR037377 -
Vivi3g04572 779 Gene3D - 355 433 IPR038336 -
Vivi3g04572 779 SMART bromo_6 200 310 IPR001487 GO:0005515
Vivi3g04572 779 PRINTS Bromodomain signature 254 272 IPR001487 GO:0005515
Vivi3g04572 779 PRINTS Bromodomain signature 238 254 IPR001487 GO:0005515
Vivi3g04572 779 PRINTS Bromodomain signature 222 235 IPR001487 GO:0005515
Vivi3g04572 779 PRINTS Bromodomain signature 272 291 IPR001487 GO:0005515
Vivi3g04572 779 MobiDBLite consensus disorder prediction 549 577 - -
Vivi3g04572 779 MobiDBLite consensus disorder prediction 714 779 - -
Vivi3g04572 779 SUPERFAMILY Bromodomain 184 313 IPR036427 GO:0005515
Vivi3g04572 779 ProSiteProfiles Bromodomain profile. 219 291 IPR001487 GO:0005515
Vivi3g04572 779 Gene3D - 191 315 IPR036427 GO:0005515
Vivi3g04572 779 MobiDBLite consensus disorder prediction 168 195 - -
Vivi3g04572 779 PANTHER TRANSCRIPTION FACTOR GTE8 174 764 - -
Vivi3g04572 779 Coils Coil 201 221 - -
Vivi3g04572 779 MobiDBLite consensus disorder prediction 621 689 - -
Vivi3g04572 779 MobiDBLite consensus disorder prediction 714 729 - -
Vivi3g04572 779 MobiDBLite consensus disorder prediction 1 35 - -
Vivi3g04572 779 MobiDBLite consensus disorder prediction 492 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04572 Vivi-Chr3 82888154 82893441 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04572 - - gmx:100776368 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04572 3 82888154 82893441 Vivi3g04572 3 82888154 82893441 ECH