Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04551 ATGGCGCCGCACGATCTCCGCCGTCCGTTTAAACGACCGTTGATCTCCGATCAAGAGAGGCGCCGACAACATTCGCTACTTCGCCAGGCACAGAATCGCCTCGACGCTCAGCGTCAGGCTCGCTTCTTAGCCTCCACCGCATTCTCTCTCTCATCCCAAACCCCCGAACCGGAACCCGAACCCGAACCTGTGAACGAACCGGAGCCATATCAGAAAGAGGAACTCGACGTATTGGAAGCGTCGAAGCTGAAAGGCGCAGAAGCTCGGAAATGGTTCGCGAAACAACTCATGCTTCCTGAATGGATGATTGATATCCCCGAAAACCTCGCCAGTGATTGGTTTGTTTTTGCAAGGCCTTCTGGAAAACGGTGTTTTGTGGTTTCTAGCAACGGAACAACTATAAGCCGTTTGCGAAACGGTTCAATACTTCACCGTTTTCCTTCTAAATTGCCCAATGGGGCAAGGACAAAAGAAGTTTCATCTGCTTCTAACTCATACTCTATACTTGACTGCATTTTCCACGAGCAAGATCAAACTTACTACGTTATTGATATGGTTTGTTGGCGTGGCTACTCCCTTTATGATTGTACTTCTGAGTTCAGGTTCTTTTGGGTGAACTCTAAGCTTGCTGAGACCGGGGCTTGTGACTCTCCTTCATATTATCATAAGTATAAGTTCAGTTTAGTTCCGGTGTATGGTTGTGATCAGAGTGGTTTGTGTTCGGCTTATTCTGCGCCTGTGCCTTATGTCAAAGACGGTCTTCTATTCTATAACAAGCATGCACATTACCAGGCTGGGAATACGCCATTAGCATTAGTTTGGAAAGATGAGAACTGCAGTCAATATGTTATGGATACTGACAGTCAAGGACAGGTTCCTAACCAACAGCAGGTGGTTTTGGAGCTTCAAGAAGATGGAAAACTGACTACTTGCGATGATCCTCATGTCGTATTTGGCTGTTTGGACGGAAGCTTCATCCAGCAGTCAGATTTGCATTCGGGGTATCTTCTACGGTTTGCAATTGGAGAAGGGGGATTGCTTTTGGTGGATGGGAAACTTGAGAAGGCTGATCTAAAGTATCTTGGCAAGGCCAATCGAGCCCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATATAGTGTTCGACACTCCCCCCTCAGAGTTGATGATCTGTTGGGATCTGTCAGCTCACCAGTAGATCAAGAAAATAAGGCCTGCGACATTGAGATGGATGGTTGA 1245 0.4691 MAPHDLRRPFKRPLISDQERRRQHSLLRQAQNRLDAQRQARFLASTAFSLSSQTPEPEPEPEPVNEPEPYQKEELDVLEASKLKGAEARKWFAKQLMLPEWMIDIPENLASDWFVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSKLPNGARTKEVSSASNSYSILDCIFHEQDQTYYVIDMVCWRGYSLYDCTSEFRFFWVNSKLAETGACDSPSYYHKYKFSLVPVYGCDQSGLCSAYSAPVPYVKDGLLFYNKHAHYQAGNTPLALVWKDENCSQYVMDTDSQGQVPNQQQVVLELQEDGKLTTCDDPHVVFGCLDGSFIQQSDLHSGYLLRFAIGEGGLLLVDGKLEKADLKYLGKANRARASADSFSKVMFQYSVRHSPLRVDDLLGSVSSPVDQENKACDIEMDG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04551 414 MobiDBLite consensus disorder prediction 45 69 - -
Vivi3g04551 414 CDD Snurportin-1_C 91 277 - -
Vivi3g04551 414 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 91 275 - -
Vivi3g04551 414 Gene3D DNA ligase/mRNA capping enzyme 2 302 - -
Vivi3g04551 414 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 413 IPR017336 GO:0005634|GO:0005737|GO:0061015
Vivi3g04551 414 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04551 K13151 - gmx:100801927 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04551 3 82607624 82611623 Vivi3g04551 3 82607624 82611623 ECH