Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04533 ATGGCTTTTCGCTCCTTCTTCCTCTCATTTCCTTCCAAAATCACAAACTCCAAAACCCTCATAAACCCTAACCACACCTTCACCCTCCAATTCTCAACCTCTTTTCTCGTCACCAAAACCCCAAAAAAGCTCAAGAAAAAACACAAACCCAAATCAAGCCCCCGAACCAACCCAATCCAAACCCAGCCAAATCGCATAACCCAATTCGAACGAATCGTACAACGCGACGCCCTAACAAAATTCGTAACAAAATCAAAACAGTATCTCTCCAATCAACCCGAACATGTTCTCCAGCTCGACGACGCCGGTAAACTCCACCGCGAACTCGGCTTCCCCCGCGGCCGGAAGGTTTCCCGATCCATTCAACAGCATCCTCAACTCTTCCAAACCTACCGCCACACAAACGGCAAAATGTGGCTCGGATTCACCGATCTCATGGAAGAACTCCTCGCCGAAGAACAATCCGTTATGGAATCAATGGAACTCGATCGTGTCGATAAGGTTGGTAAGCTTCTCATGATGTCCGCGAATCACCGTATTCCGCTTAGTAAATTGCATCACTGTAGAATCTTATTTGGTTTACCTGATGATTTTCGTGACCGTGTTGTGAAGTACCCTAACTATTTCCGTGTTGTTGTAGATGACAACAATGACGGAAAGCATGTTCTTGAGTTGGTTAATTGGGATCCGCTTTTGGCGGTGAGTGCGCTCGAAAGAGAGTTTGTTGTTAATGAGGAAGGTGCTAAGAGGAAGTTTCATTTTCCTGTGAAGCATGGGAAGGATTTGGATTTGGAATTGGATGATAAGAGGAAGTTGAATTTGTTAAACGCGCTTCCGTTGGTTTCTCCGTATTCGGATGGTTCGAAATTAGATGTGTGGACTTTGGAAGCTGAGAAGTATAGGGTTGGATTGATTCATGAGTTTTTGAATTTGACGTTGGAGAAGAGAGCTTCGATTCATCACCTTGTTGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCATATGCTGCTTAAGCAGCCGAGGGCGTTTTATTTGGCGGGAACTGAGATGAATTGGGTTGTGTTTTTGAAAGATGGTTATGATAGAAACGGTGTTTTGATTCATAAGGATCCTCAAGTGGTGTTCAATGAGAAGCTTTATAAGTATGCTCAGATACAGGATGAGGAAATGGAACCCGGTTCTGATGTTGGATTGGAAAATCAACCTATCACTTGA 1224 0.4379 MAFRSFFLSFPSKITNSKTLINPNHTFTLQFSTSFLVTKTPKKLKKKHKPKSSPRTNPIQTQPNRITQFERIVQRDALTKFVTKSKQYLSNQPEHVLQLDDAGKLHRELGFPRGRKVSRSIQQHPQLFQTYRHTNGKMWLGFTDLMEELLAEEQSVMESMELDRVDKVGKLLMMSANHRIPLSKLHHCRILFGLPDDFRDRVVKYPNYFRVVVDDNNDGKHVLELVNWDPLLAVSALEREFVVNEEGAKRKFHFPVKHGKDLDLELDDKRKLNLLNALPLVSPYSDGSKLDVWTLEAEKYRVGLIHEFLNLTLEKRASIHHLVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDGYDRNGVLIHKDPQVVFNEKLYKYAQIQDEEMEPGSDVGLENQPIT 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04533 407 MobiDBLite consensus disorder prediction 40 63 - -
Vivi3g04533 407 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 45 393 IPR045040 GO:0003723
Vivi3g04533 407 Pfam Plant organelle RNA recognition domain 65 388 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04533 Vivi-Chr3 82228168 82230722 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04533 - - vvo:131662060 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04533 3 82228168 82230722 Vivi3g04533 3 82228168 82230722 ECH