Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04527 ATGGACGCCACTTCTGAATCCTCCGACCAAAAACCCGTTGATCTTCCCGTCATTGATCTCCGCCTTCTCTCTCAATCGGAGCTATACACTATCTCCCTTTCGCACGCTACCGCCTGTAACCGTCGCATCGACGAAGATTGCGTTATCCCTAAAATTGACCGTTCGGTTTTCAAAGAGTCCGCCGGTAGCCGGAAACAGACGTTTTCTCGTCTCCGTCTGTTTCCTCGTAGCAACAATAACCCGTACTCTCCCGTTCCCGTTCCGGTTTCTGCTGCTTCCGCTCCTGTTGCGGTTGTTCCCGCTCCAACGTCTACGGGAAGCCGCATTACCGGTGACGGTGAGAATTCACAAATAATCGATCTCCTGCAAGAACTATTCGGCGTTGAGCCTCTCCGCGGTGCGAATAATGACCGTGCTGTTCCGTTGCAAATTGAATTCAAACAACCGGCTATTGAATTTACGCCTCAGGCTGTTCAGAATGTTCCGATTGATGGTAGTCAGGGGAAGCGAAAGCGCGGAAGGCCTCGCAGGGGCGAGACTCCGGGGACGGAGACTCGTTTAGCCATTTGCGATGGTAATGGGAAGGCGATGGAAACGGATGATGAGAAGAAGGTGAAAAGTGTTAATCACAAGAAGAAGAAGGTGGAGACGGACAATGAGAAGCAGGGGTTTGTTCTGGATGATGCTGGGGATCCGTTTGTGGAGGAGTTGATCGTGAGGACGCAAGGGATGAATACGGAGCCAGAGTTGGTGGAGTTTTTGGAGGGTTTGAATGGAGTTTGGGGAAGTGATAGGAAGAAGAGGAGGATTGTTGATGCTAATTGTCTCCGTGATGTGCTGCCGACTGGATGGAAACTCATACTTATTCTTCAAAGGAGAGGGAGTCGCGCTTCGGTGATATGTCGCCGATACCTAAGCCCTGACGGAGGCCAGTTTGAGACATACAAGGATGTTTCTTCACACTTGGTTTCTTCGTTTGGTGTTCAAGACGCGAGCCACTTAAAATCTAGTTATACTGATGGTAGTAAGCAGTTTTCCAGCAATATCAATATGTCATCGGAAAATAATATTGGTCATGTCCCTCCAGGTGGCATTCAGATTGATGCCAATGCCAGTTCTCATCATGAGAAGCAAACCACCATATCATCATCAATTGGAACTGAAAAGCGAAACACTTCTGATGGGAATCTAAATGGTGACCTGGCAGCTATGGATTTTGAATTAGGTGATGCCACCAATGGAGCCTTTAGAGTCTCTGACCATCCAACTGACAATAAGCTACGACTGGAGGCAGATAATAACGATGCAAACTCAGTTCAGGAATGCTTTCTTTCAGAGGACAGAGTTTATAATCAGAGTGTTGGTTCCATCCCTACCGGTGACATGAAGATTGATGCCAATACAAGTTCTCATCAGGAGAAGCAGGCCACCATGTCATCATCAATTGGGACTGGATGGAATGAAACTGTTCTCTATGGAAATGAGCAAGTACGTGATGGTGACAATGAGCTTGGGCTTTCTACCACATTAATGGAAAACCACATCCAGAAAATATCTTCTGAAAGCGGCATGCTGGTTCCAAATTCTCAACATATTTCTACTAATGGTAAACTTCAGTTTTGTTCTGAAGGCTCTCTTGTCCCATCACAGAATGAACTTAGCCATACATCTATAGAGAGTATGGATAGGGAACAAACTTCTGTGCTGAAGGACTCTGCTGAGGCAACACTAAATTATAATGATTTACCTGGCTCGTCCACTGATGATTATATGAATAATATTTCTTTTGATCCCTGGCAACAAGATGCACCTGTGTCTGGTGTAATTGATTTTACTCCCAATCTTTATCTAACTAATGGTTTTGGGGATAATCATGCTCCTCCATTAGACGAAGTTACGACAAGCTGTTTACAGAAAATGAGTTCTATGAAGGACCAAATTTGCACAATGGACAATATGTTGCATAAAAGGTCTGAAAGTAACTTATCTACTGTAGCCGGGAATCAGCACCCTTCTGCTCTCCATGATTATACGGATGACATCTCAGCTGGAACCTTTGGTGCAGTCAAACATATTGATGCAACTCCTAGAGTCGTGCAAGAGATATCACAATCTGTTTCTCCTGATGGAAATATATTAAACCAGGTTGACAAGTAG 2157 0.4525 MDATSESSDQKPVDLPVIDLRLLSQSELYTISLSHATACNRRIDEDCVIPKIDRSVFKESAGSRKQTFSRLRLFPRSNNNPYSPVPVPVSAASAPVAVVPAPTSTGSRITGDGENSQIIDLLQELFGVEPLRGANNDRAVPLQIEFKQPAIEFTPQAVQNVPIDGSQGKRKRGRPRRGETPGTETRLAICDGNGKAMETDDEKKVKSVNHKKKKVETDNEKQGFVLDDAGDPFVEELIVRTQGMNTEPELVEFLEGLNGVWGSDRKKRRIVDANCLRDVLPTGWKLILILQRRGSRASVICRRYLSPDGGQFETYKDVSSHLVSSFGVQDASHLKSSYTDGSKQFSSNINMSSENNIGHVPPGGIQIDANASSHHEKQTTISSSIGTEKRNTSDGNLNGDLAAMDFELGDATNGAFRVSDHPTDNKLRLEADNNDANSVQECFLSEDRVYNQSVGSIPTGDMKIDANTSSHQEKQATMSSSIGTGWNETVLYGNEQVRDGDNELGLSTTLMENHIQKISSESGMLVPNSQHISTNGKLQFCSEGSLVPSQNELSHTSIESMDREQTSVLKDSAEATLNYNDLPGSSTDDYMNNISFDPWQQDAPVSGVIDFTPNLYLTNGFGDNHAPPLDEVTTSCLQKMSSMKDQICTMDNMLHKRSESNLSTVAGNQHPSALHDYTDDISAGTFGAVKHIDATPRVVQEISQSVSPDGNILNQVDK 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04527 718 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 15 395 IPR037472 -
Vivi3g04527 718 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 270 343 IPR001739 GO:0003677
Vivi3g04527 718 SUPERFAMILY DNA-binding domain 273 325 IPR016177 GO:0003677
Vivi3g04527 718 MobiDBLite consensus disorder prediction 161 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04527 Vivi-Chr3 82168750 82174447 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04527 - - cam:101492327 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04527 3 82168750 82174447 Vivi3g04527 3 82168750 82174447 ECH