Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04520 ATGGCACTGCTAGAAACCCAAATTTCCAACCCCCAACACCATTCCCACTCTCTTCCCATTTTCTTCAACCCCAGTTCCGAATTTGTTACCGGCGGTTTGTTTCTCGAACCCTCAATTCCCGATTCCTTCGCTCGTTTCATTTCGTTACGGCTCCCCGCAGTTGCTTCCTCTGAACCAATTCTTCACCGGCGGCATCGGAAAAGGGTTCCGGCGGTTAGATGCTTTTTGTCGGTTAGCTTGCCGAGTAGTAGTACTGCTCTTCCTGTCGATCCCAAACCGTATGTATTGCAAAATGGTGAACACGTCTCTGATAAAGAGACAACCACCGCCGACGGTGACGTTTTGCCTAAAAAGGTTAGGGCAAGAGAACGCGGTGCTATCAATAATACAACTAAGCATCTTTGGTCTGGTGCTATATCTGCCATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAATATATGGTTCGTGGTGAGACGAGAAATATCTTTGAGGTTATTAAGTCAATTGCTACTTCTCAAGGGTTGAGAGGTTTTTGGAAGGGGAACCTTCTAAATATTCTGCGAACGGCTCCGTTCAAAGCTGTTAATTTTAGTGCATATGATACTTATCGAAAGCAACTACTTAGATTCTCTGGGAATGAAGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGTCACTGCTACTATTATTTGCCTGCCACTTGACACTATTCGGACCAAGATAGTGGCACCTGGCGGAGAAACTTTGGGTGGTGTAATTGGTGCTTTCCAACACATGATTCGAACTGAAGGCATCTTTTCTCTATACAAGGGTTTAGTACCATCACTTATAAGCATGGCTCCATCTAGTGCTGTATTTTATGGTGTGTATGATATGCTAAAATCATCCTATCTGCATTCACCCGAAGGAATGCAAAGAATCCAGAATTTGCACAAACAGGGTCAGGAATTGAGTGCCTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACATTGCTGTATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTCGAGGTTGTGAGAAGGCAGCTTCAATTGCAAGTCCAGTCTACTAAATTAAGTTCTTTAGCAACTTTTGTCAAAATAGTGGAACAAGGAGGCGTTTCTGCCCTCTATGCTGGACTTGTTCCCAGCTTATTACAGGTACTTCCTTCTGCATCAATTAGTTACTTTGTGTATGAGTTCATGAAGATTGTTCTCAAAGTAGAGTGA 1275 0.4408 MALLETQISNPQHHSHSLPIFFNPSSEFVTGGLFLEPSIPDSFARFISLRLPAVASSEPILHRRHRKRVPAVRCFLSVSLPSSSTALPVDPKPYVLQNGEHVSDKETTTADGDVLPKKVRARERGAINNTTKHLWSGAISAMVSRTCVAPLERLKLEYMVRGETRNIFEVIKSIATSQGLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATIICLPLDTIRTKIVAPGGETLGGVIGAFQHMIRTEGIFSLYKGLVPSLISMAPSSAVFYGVYDMLKSSYLHSPEGMQRIQNLHKQGQELSAFDQLELGPVRTLLYGAIAGACAEAATYPFEVVRRQLQLQVQSTKLSSLATFVKIVEQGGVSALYAGLVPSLLQVLPSASISYFVYEFMKIVLKVE 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04520 424 Gene3D Mitochondrial carrier domain 125 423 IPR023395 -
Vivi3g04520 424 PANTHER SOLUTE CARRIER FAMILY 25 125 423 - -
Vivi3g04520 424 FunFam Mitochondrial substrate carrier family protein 127 424 - -
Vivi3g04520 424 Pfam Mitochondrial carrier protein 335 421 IPR018108 -
Vivi3g04520 424 Pfam Mitochondrial carrier protein 130 213 IPR018108 -
Vivi3g04520 424 Pfam Mitochondrial carrier protein 221 308 IPR018108 -
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 236 254 IPR002067 GO:0055085
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 344 366 IPR002067 GO:0055085
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 186 206 IPR002067 GO:0055085
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 146 160 IPR002067 GO:0055085
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 133 146 IPR002067 GO:0055085
Vivi3g04520 424 PRINTS Mitochondrial carrier protein signature 279 297 IPR002067 GO:0055085
Vivi3g04520 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 306 IPR018108 -
Vivi3g04520 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 211 IPR018108 -
Vivi3g04520 424 SUPERFAMILY Mitochondrial carrier 128 417 IPR023395 -
Vivi3g04520 424 ProSiteProfiles Solute carrier (Solcar) repeat profile. 335 420 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04520 Vivi-Chr3 82059721 82067018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04520 206 418 Organic Solute Cotransporters AT5G64970 19.718 1.09e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04520 - - gmx:100816623 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04520 3 82059721 82067018 Vivi3g04520 3 82059721 82067018 ECH