Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04491 ATGGCTACAGAAGTAGGTCACCATGCTATTGGGACTTTGCAGTCTCATTCTTATCTTAGTAATTTGAATCATAGCCAAAATCTCAGGAGCGGTTCGCTAAGATTGGCGACGAAGGATTTTATCTCTAGTAATAATGGTTTGTCAATGGGAAGAAGTAGCCACTTTGGCTGGAGGAATTGTTTTGTAATTCGGTCTTCAGCTTCCCATTCTCAGACGTCGGTTGTTGATCCGGTGTTGTCCCCTTCAAGAAGCAACAGTGGTGACACTCCTAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACATGGTGAGTCGTTGTGGAATGAAAAGAATTTGTTCACAGGTTGTGTTGATGTACCACTTAGCCAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAAGATTAGTAACATACCTGTTGATGTCATATTTACATCTGCGTTGATTCGTGCACAAATGACAGCTATGCTTGCCATGACCCAGCACCGCCGTAAGAAGGTGCCTGTTGTTTTGCATGACGAAAGTGAGCAAGCAAAAGCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAAGCAGTCCATTCCAGTCACAACGGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATACGGCAAAGAGCAAGTCCATGAGTGGCGCCGAAGCTATGACATACCTCCTCCCAATGGCGAAAGTTTGGAAATGTGCGCTGAAAGAGCGGTTGCCTATTTCAGAGACCGGATTGAACCCAAACTTTTATCCGGAAAGAATGTTATGATTGCAGCACACGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAGTTAACTTCCCAGGAGGTCATTAGCTTAGAACTGTCAACCGGAATTCCAATGCTTTACATTTTCAAAGAGGGAAGATTCATTAGGAGGGGGAGTCCTACTGGACCAACTGAATCTGGAGTTTATGCCTATACCAAGCATTTGGCTCTTTACAGACAGAAGTTGGATGAGATGTTTCAATAA 1047 0.4269 MATEVGHHAIGTLQSHSYLSNLNHSQNLRSGSLRLATKDFISSNNGLSMGRSSHFGWRNCFVIRSSASHSQTSVVDPVLSPSRSNSGDTPKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSQKGIDEAIEAGKKISNIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPVVLHDESEQAKAWSQVFSEDTKKQSIPVTTAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDRIEPKLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPTGPTESGVYAYTKHLALYRQKLDEMFQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04491 348 Pfam Histidine phosphatase superfamily (branch 1) 193 301 IPR013078 -
Vivi3g04491 348 Pfam Histidine phosphatase superfamily (branch 1) 98 175 IPR013078 -
Vivi3g04491 348 PANTHER PHOSPHOGLYCERATE MUTASE 87 334 IPR005952 GO:0006096|GO:0016868
Vivi3g04491 348 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 95 322 IPR005952 GO:0006096|GO:0016868
Vivi3g04491 348 CDD HP_PGM_like 98 317 IPR013078 -
Vivi3g04491 348 SMART PGAM_5 97 283 IPR013078 -
Vivi3g04491 348 SUPERFAMILY Phosphoglycerate mutase-like 98 314 IPR029033 -
Vivi3g04491 348 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 100 109 IPR001345 GO:0003824
Vivi3g04491 348 Gene3D - 88 322 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04491 Vivi-Chr3 81189042 81191897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04491 K01834 - gmx:100802621 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04491 3 81189042 81191897 Vivi3g04491 3 81189042 81191897 ECH