Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04478 ATGGGAGTACAAGGTACTTTGGAATACTTGTCTGATTTACTCAGTAGCACCACAAAGAAGAAGAAAAAGAAGCAAATCCAAACTGTATCTCTCAAAATCAGAATGGATTGTGATGGCTGTGTTCGTAAAGTTAAACATGTCCTTTCCGGTGTTAAAGGAGTTAAGAAAGTGGATGTGGATATGAAGCAGCAGAAAGTAACAGTGAGTGGATATGTTGAACCAAAGAAAGTGTTGAAAGCTGCACAATCAACAAAGAAGAAGGTTGAACTTTGGCCTTATGTTCCATACACTATGGTGGCTCATCCATATGTTTCTCAAGCTTATGATAAGAAAGCACCTCCTAATATGGTTAGAAAAGTTGGAGACACTTCCAACACAAAAGAGACCACCTTTGATGATAGCTATGCTGAAATGTTCAGTGATGAAAATCCAAATGCATGCTCTATTATGTAA 453 0.3775 MGVQGTLEYLSDLLSSTTKKKKKKQIQTVSLKIRMDCDGCVRKVKHVLSGVKGVKKVDVDMKQQKVTVSGYVEPKKVLKAAQSTKKKVELWPYVPYTMVAHPYVSQAYDKKAPPNMVRKVGDTSNTKETTFDDSYAEMFSDENPNACSIM 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04478 150 ProSiteProfiles Heavy-metal-associated domain profile. 26 89 IPR006121 GO:0046872
Vivi3g04478 150 Gene3D - 13 92 - -
Vivi3g04478 150 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 28 148 IPR045181 GO:0046872
Vivi3g04478 150 Pfam Heavy-metal-associated domain 33 86 IPR006121 GO:0046872
Vivi3g04478 150 SUPERFAMILY HMA, heavy metal-associated domain 27 92 IPR036163 GO:0046872
Vivi3g04478 150 CDD HMA 35 89 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04478 Vivi-Chr3 80722313 80723282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04478 - - gmx:100782955 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04478 3 80722313 80723282 Vivi3g04478 3 80722313 80723282 ECH