Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04476 ATGAAGACTCGTGCGTCTACCAAAATCTCTGCTAAATGGATTCCAATTTTCTCTGTCTTTTCCTTCCTTATTGGCATGCTTATCACAAACAGGATGTGGGAGCAACCTGAATCAAGTGGTTTGATACTTTCTAAGCATCAGCGTGATCAACAAGAACTTCAACTGATCTCAGAAGATTGTTCTAACAAAAAGAAGCAGGAAAAGCCTAAGGATGAAATGAATGAATTGTATAAAACCCATGAAGCTATTCAGGCTCTAGACAAACAAGTTTCTATGTTGCAAATGGAATTAGCAGCAGCTAGGAGTTCTCGCGAAAAGAACTCAACTGGCTCGGCCACTGATTCCGGGGAAGGTGCTTCCAAAAAGAAGAAGGCGTTTGTAGTGATAGGTATAAACACGGCTTTCAGTAGCAGGAAGCGACGTGATTCTGTTAGAGAAACTTGGATGCCTCAAGGCGAACAACTTCTTCAGTTGGAACGAGAGAAAGGAATCGTCATCAGATTCATGATTGGTCACAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCTCAACACAAAGACTTCCTTCGCCTGCAACATGTGGAAGGGTATCATGAGCTGTCTGCAAAAACAAAGACTTTCTTTTCTACTGCTGTTGCATTATGGGATGCTGATTTCTATGTCAAAGTCGATGATGATGTTCATGTCAATTTAGGTGTCCTAGCAGCAACCCTTGCTCGTCATCGTACAAAACCGAGGGTCTACATTGGGTGCATGAAATCTGGACCTGTTCTATCTCGAAAGGATGTCAAGTACCATGAACCTGAGTTCTGGAAGTTTGGAGAAGAGGGAAACAAATACTTCCGACATGCAACCGGGCAGATATATGCAATCTCTAAAGATTTGGCCACTTACATTTCCATTAACCAGCCGATTTTACACAAATTTGCTAATGAAGACGTATCACTTGGTTCATGGTTCATCGGTCTCGAAGTCGAGCATATTGATGACCGCAGTATGTGCTGTGGAACCCCTCCAGACTGCGAGTGGAAGGCGCAAGCAGGTAACATATGCGTTGCATCGTTTGATTGGAGCTGCAGCGGAATCTGCAAATCAGTGGAGAAGATTAAATACGTGCACTCGAAATGTGGCGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1185 0.4329 MKTRASTKISAKWIPIFSVFSFLIGMLITNRMWEQPESSGLILSKHQRDQQELQLISEDCSNKKKQEKPKDEMNELYKTHEAIQALDKQVSMLQMELAAARSSREKNSTGSATDSGEGASKKKKAFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKTFFSTAVALWDADFYVKVDDDVHVNLGVLAATLARHRTKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04476 394 Coils Coil 83 103 - -
Vivi3g04476 394 MobiDBLite consensus disorder prediction 97 118 - -
Vivi3g04476 394 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vivi3g04476 394 MobiDBLite consensus disorder prediction 101 116 - -
Vivi3g04476 394 Gene3D - 117 340 - -
Vivi3g04476 394 Pfam Domain of unknown function (DUF4094) 10 103 IPR025298 -
Vivi3g04476 394 FunFam Hexosyltransferase 119 340 - -
Vivi3g04476 394 Pfam Galactosyltransferase 139 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04476 Vivi-Chr3 80556394 80559402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04476 1 394 Glycosyltransferase AT1G77810 70.960 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04476 K20855 - gmx:100776715 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04476 3 80556394 80559402 Vivi3g04476 3 80556394 80559402 ECH