Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04468 ATGGAGGAAAGTTTCGATTTCATCGACATCAAGCTTTCTCCGGCAAAGCTCCCACTACCACTCGATCTTCCTCAAGATCCGACGATGAAATCACCGCCGATGAAATCTCACCGCCATCTCCGGCGACGAGGCGACACGTGGGTAGTGTCTGTGATGGTAATAATCCACATAGGGTTTTTCATCACGACGATGGTGGTCAACGATTGCTACACCAATTCTCACGGTGATTGCACTTTTCCGTCTCTCGGAAGGTTATCGTTTCAGCTTCTCTCTGAAAATCCACTGTTAGGTCCTTCCATGTCCAAGTTGGATGAAATGGGAGCTCTTCGAAAGAACTTTTTGACGGAACGTCATCAAACTTGGCGTCTTTTCACGTTTCCATTTTTGCATGCTGGACTCTTCCATCTGGTTATAAATCTCTGCAGTGTGATCTATGTTGGAATTCGCCTAGAGCAGGAGTTCGGGCCACTAAGGGTTGGTATAATCTATATACTATCTGCTTTTGTGGGTGCCTTAATGGCTTCACTTTTTCTTCAAAGTATCCCTTCTGTTGGTTCTTCTGGTGCTTTATTTGGATTACTAGGAGCATTGCTTTCAGAATTAGTTTGGAACTGGAAATTTCATACCAATAAGGTTTCAGAAATAGCATCATTAGTCTTTGTTTGTGTGTGCAACTTCTTCCTTGGATTTCTGCCATATGTGGACAATTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTTGGAACTGTCCTTTTATTCACCCCTCAGCTCCAGCAAGTAGCTCCAAATAAAGGAGATCGAATTGATTATGATCTCAAAAGTTACATCAAGCTGAAGTTCAAGCAAAAGCTAGACAGACCAATTACTAGAATTGTTTCTCTTATCCTCTTCACCCTGTTATTGGCTGGTTGTCTTCTTGCAGTTCTTTATGGAGTCAACATCAACAGTTATTGCACATGGTGTCCATATGTCGACTGTATCCCTTTCACAAGCTGGCACTGCAAAGACAAAGAAACCTTTTGTGAGACAATGGTGAGTAATGCTCACTTGACGATGACATGTTTGGGGAATGGCAACTTTAAGGTCTATCATTACACCAATATCTCTCGAGCAAGGATTAATGATTTGTGCTATATGATATGTTGA 1152 0.4193 MEESFDFIDIKLSPAKLPLPLDLPQDPTMKSPPMKSHRHLRRRGDTWVVSVMVIIHIGFFITTMVVNDCYTNSHGDCTFPSLGRLSFQLLSENPLLGPSMSKLDEMGALRKNFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRVGIIYILSAFVGALMASLFLQSIPSVGSSGALFGLLGALLSELVWNWKFHTNKVSEIASLVFVCVCNFFLGFLPYVDNFSSIGGFISGFLLGTVLLFTPQLQQVAPNKGDRIDYDLKSYIKLKFKQKLDRPITRIVSLILFTLLLAGCLLAVLYGVNINSYCTWCPYVDCIPFTSWHCKDKETFCETMVSNAHLTMTCLGNGNFKVYHYTNISRARINDLCYMIC 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04468 383 Pfam Rhomboid family 116 254 IPR022764 GO:0004252|GO:0016020
Vivi3g04468 383 Gene3D - 41 256 IPR035952 -
Vivi3g04468 383 PANTHER RHOMBOID-RELATED 32 336 IPR002610 GO:0004252|GO:0006508|GO:0016020
Vivi3g04468 383 SUPERFAMILY Rhomboid-like 44 258 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04468 Vivi-Chr3 80415037 80417696 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04468 - - gmx:100793747 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04468 3 80415037 80417696 Vivi3g04468 3 80415037 80417696 ECH