Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04412 ATGGCTCCTGCTCCTTCAAAAAATTACACAGATGACGTCAGCCTCCTCGTCGTCACGCTCGACACCAACCCTTTCTTCTGGTCCGATTTCCCCTCCCACTTCTCCGACTTCCTCTCTCAAGTTCTCGCTTTTCTCAATTCAATACTCCTCCTCGGCCAACTCAACCAAGTCGTAGTTATCGCCACCGGTTGCAATTCATGTTCATACATTTACGATTCATCTTCTAATAAGAATCATGCCTCCACTAACGGCACAATGCCTGCACTTTATTCTAATCTTCTTCACAATCTCGACGAGTTCATCGCGAAAGATGAGCAATTAACAACGGCTCATGAACCTGGGAATGTTCCGTCTTCACTCTTATCTGGTTCATTGTCCAAGGCTCTATGCTATATACAGAGAGCTTTTCGTTCAGGACCAATGCATCCTCAACCTCGGATTCTATGTCTGCAAGGATCTCCCGATGGGCCTGAACAATACGTGGCAATCATGAATGCAATATTTTCTGCTCAGCGTTCTTCAGTTCCTGTAGATTCTTGTTATATTGGTTCAAGCAATTCTGCATTCCTTCAGCAGGCTTCATACATAACCGGTGGCATATATTATAAGCCTCCCCAATTGGATGGGCTTTTTCAATATCTTTCAGCAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTAAGGCTTCCTAAATCTCTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAGAAAACAATTGACACTGGCTATGTATGTTCTGTATGCTTATCCATATTCTGTGAGCATCACGACAAGTGTTCAACGTCTCTGTTTTTGGCCAGGCTCAATCTGTTGCCGCTTCAACAGACAATCGGAAAAGGAAGGCTGAATAATGTTTCTGGGCTCGTATCACTTATTTTGTGA 912 0.4386 MAPAPSKNYTDDVSLLVVTLDTNPFFWSDFPSHFSDFLSQVLAFLNSILLLGQLNQVVVIATGCNSCSYIYDSSSNKNHASTNGTMPALYSNLLHNLDEFIAKDEQLTTAHEPGNVPSSLLSGSLSKALCYIQRAFRSGPMHPQPRILCLQGSPDGPEQYVAIMNAIFSAQRSSVPVDSCYIGSSNSAFLQQASYITGGIYYKPPQLDGLFQYLSAVFATDLHSRAFLRLPKSLGVDFRASCFCHKKTIDTGYVCSVCLSIFCEHHDKCSTSLFLARLNLLPLQQTIGKGRLNNVSGLVSLIL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04412 303 FunFam RNA polymerase II transcription factor B subunit 4 10 221 - -
Vivi3g04412 303 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 9 272 IPR004600 GO:0000439|GO:0006289|GO:0006355
Vivi3g04412 303 Gene3D von Willebrand factor, type A domain 10 221 IPR036465 -
Vivi3g04412 303 Pfam Transcription factor Tfb4 13 271 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04412 Vivi-Chr3 79373725 79380547 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04412 K03143 - gmx:100810574 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04412 3 79373725 79380547 Vivi3g04412 3 79373725 79380547 ECH