Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04405 ATGGAAACTCGCGAAACCGCCGCAAAGTCGGGTGAAAACCCAAGCAACGGAATTAGGAAAGTTAACTTACGAGCTGAGATTGATACATCGCCGCCGTTCGAGTCAGTCAAGGAAGCCGTGACCCGCTTCGGCGGAAGCGGGCCATGGTTACCTCTTTACAGACTCGGAGAAGCTTTTAACAACTTTGAAGATTTTGATTTAAAGAAAGTGGAGGAACAAGCTGCGGAGTTGGAGAAAGACTTAATTGTGAAAGAACTAGAAACACTTGATGTGCTCGAAGAGCTCGGCGCGACGAAAAGGATTGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAGGCATTGAAATTGTCCGGGACTCCGGATTTGCATTCTTATGAACATGTTGGAGCTCCAGTTGTTAAGGAGATGAATAAGGAAAGTAATGGGAATAGAGTTAACAATGAAGAGCAGATATTGCAATCACCTGATATGATTTTAATGGAACTGAAACAAGCCAAGGTGAACCTTGGTAATACTATGAATGAGCTTGAGGCGATACAATCGTCGGTTGAGTCTTTGAATAAGAAGATGAAGAAAGAGAAAGCTTATCTGGAGAGGACGAGAGAAAAGCTGGCGTCGAAGTTTGCAGCAATGTCTGCTCAAGAGAAGGTTGCAGCTATGTCTGCTCAAGAGAAGGCCCAAGAGGATGCGAGATTGAGTCCACCACCATCATCTCGTGTGGAATTCACTTTCGATGTTCCTGCAAATATGAGGGATTTCAATTGTGATTCGGATCAGAACAATGGAATGGTTGAAATGAGACAATCTGAAGGTTTAAAGCCGTTGTCGTTGTATGAAGAACATGGGTTTAGTGTTAAGACCGCGGAGATGAGGTGGCTTGCAGCCAAAAAGATGGAGGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTGGTGCTGGGAGATCGTATGAGTTCGCTCTACCAGAGCCTCGGAAGGTCACTTTTTCTTTGGCCGAAAACTCTCCTCTAAATCCCGGGGCTATGATGATACCTGAGGAGTTTAACTTGAAGAAGGTAATAGATTCGAAGTTTCAAATGGATGAAACAAATATTTCCAAACTGACTATTCTGAAAAAGCTGGAGGAGGCATCTGAAGAAATTCTACACAGCAAACAAGTCTTAAATGATGCTTTAAACAGAATTGAAATTGCAAACAGAAAACAACATGCTGCTAAGGAAGCTCTGCGGAAATGGATACCCGAGGTTGATCTAAAGGAGAAACCAGTGTATAACTCTTTTAACTTCAACAAGTTTAATCAAGCTGGAATTCGTCACGATTCTTCTCTACCAGATGTAACCAGGTCAACAATAGCAAACAATACTCCAAAGCGTGTTTCGAGGCCAACAACTTCAATGAGAGATGTTCTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTGCAAGAAAGGAAATGGAAGAACATACTGAAAGACGAAAGGTAGCATTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACCCTTTCACCAGAACCTGAGAAAGATCCTCGGAGCGATCAAAAGCAGTCCGCGACACCAAGGAAGAAGTTTGGATTCATCCATATATCACTCCCTATGTCCAGGACAAGTAAGAAAAGGACGTGA 1665 0.4318 METRETAAKSGENPSNGIRKVNLRAEIDTSPPFESVKEAVTRFGGSGPWLPLYRLGEAFNNFEDFDLKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKLSGTPDLHSYEHVGAPVVKEMNKESNGNRVNNEEQILQSPDMILMELKQAKVNLGNTMNELEAIQSSVESLNKKMKKEKAYLERTREKLASKFAAMSAQEKVAAMSAQEKAQEDARLSPPPSSRVEFTFDVPANMRDFNCDSDQNNGMVEMRQSEGLKPLSLYEEHGFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSGAGRSYEFALPEPRKVTFSLAENSPLNPGAMMIPEEFNLKKVIDSKFQMDETNISKLTILKKLEEASEEILHSKQVLNDALNRIEIANRKQHAAKEALRKWIPEVDLKEKPVYNSFNFNKFNQAGIRHDSSLPDVTRSTIANNTPKRVSRPTTSMRDVLSRKQVPEGYAARKEMEEHTERRKVALSQMLQALREDLTLSPEPEKDPRSDQKQSATPRKKFGFIHISLPMSRTSKKRT 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04405 554 Coils Coil 159 207 - -
Vivi3g04405 554 MobiDBLite consensus disorder prediction 450 474 - -
Vivi3g04405 554 MobiDBLite consensus disorder prediction 511 554 - -
Vivi3g04405 554 Coils Coil 60 87 - -
Vivi3g04405 554 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 25 112 - -
Vivi3g04405 554 Coils Coil 380 414 - -
Vivi3g04405 554 Coils Coil 92 112 - -
Vivi3g04405 554 MobiDBLite consensus disorder prediction 514 531 - -
Vivi3g04405 554 Pfam Weak chloroplast movement under blue light 132 420 IPR008545 -
Vivi3g04405 554 Pfam Weak chloroplast movement under blue light 25 111 IPR008545 -
Vivi3g04405 554 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04405 Vivi-Chr3 79268003 79270333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04405 - - mtr:11406780 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04405 3 79268003 79270333 Vivi7g02246 7 85360653 85364356 ECH
Vivi3g04405 3 79268003 79270333 Vivi3g04405 3 79268003 79270333 ECH
Vivi3g04405 3 79268003 79270333 Vivi7g02246 7 85360653 85364356 PCT