Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04395 ATGGAGGCAGTTCAAACATGGGTTTCAAAGAACAAACTTGCCAGCATTGGTGCACTATGGGCCTCTGGAATTGGAGCAACACTTGTAGCTTATTCACGAACTAAATCTCCAATGAAACCGAGTCTAAGGCTTATCCATGCTAGGATGCATGCACAGGCGCTAACTCTAGCAGTGCTTTCGGGTGCAGCTGCGTATCACTATTATGAAAATCGCGATGTTGATTTAAAACCAGTGGCAGATGATAGTTCTGCTCCAAATGTTAGCCATCTAGTTGAATGGGAGCTCCACAGTCCATTTTAA 300 0.4433 MEAVQTWVSKNKLASIGALWASGIGATLVAYSRTKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYENRDVDLKPVADDSSAPNVSHLVEWELHSPF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04395 99 Gene3D - 13 71 - -
Vivi3g04395 99 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Vivi3g04395 99 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 1 74 IPR040153 -
Vivi3g04395 99 Pfam Hypoxia induced protein conserved region 10 61 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04395 Vivi-Chr3 79091049 79091809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04395 - - tpra:123894858 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04395 3 79091049 79091809 Vivi3g04395 3 79091049 79091809 ECH
Vivi3g04395 3 79091049 79091809 Vivi7g02235 7 85243753 85244725 PCT