Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04366 ATGAAGCCCAACACTCAGGCTTCCTTCGCCACTGCAACGCCGCACGTGACTTACTTTCACCGCGCAACTCTCTCACGTGCCAAACCTTCCCAAACTCATCCTCCAACGCTCAACCAAAAAACCGCCAAACGCCGCCGTGTCAACCTCCATCTCCCCCACACCAACCGTATAATTGCTGCTCGGAAAACCGAACACCACGACGGGAACGATGAAGTGAGTGAATCCTCAGTCGAGCAGAGAGAATGGTCTCGAGCTCGAAGCAACCGGCGAGGTGTCCTGGTGGCGCCTTTTCTAGCCGTTGGCGCTTCGTTCTTGCTATCTTCGGCGTCGACGAGGGCGGCGGAAGAGGAGAAGGCGACGCCGGTGGAGGTAACGGTTGTGAAACCGGAGGAGATGAAGAAGATAGAGGAGGAAGTGATAACTTCGAGGATTTATGACGCGACGGCGATTGGTGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAAGTGTGGGAGAAGTTGATGAATGCTAGGGTTGTTTATTTGGGGGAAGCTGAACAGGTTCCTGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTCAAGAATTTGCATAAGCGTTGTGTTGAGATTGATAAGCGTTTATCTTTGGCTATTGAAGCGTTTCCCTCTGATCTTCAGGAACCACTCAATCAGTATATTGATAAAAAGATAGACGGAGAAACCTTGAAGACTTACACGGCGCATTGGCCGCCTGAACGGTGGCAGGAGTATGAACCTATTCTTAGTTACTGTCGTGAAAATGGAATTCATCTTGTTGCTTGTGGTACTCCATTGGAGATATTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTGACAAAGGCTGAACGTAATTTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGATTTTCTTCTATGTCGCGTAGATTATCACTGGATAATACTCCAAATCTGTCGTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTAGTTGACGAGTATACTATGTCCCAGATCATCTTACGCAGTATGCTTGATGGAGGGGCTACCGGTATGTTGATAGTTGTGACTGGTGCAAGCCATGTCACATATGGATCTAGAGGAACTGGAGTGCCCGCAAGAATTTCAAGAAAACTGCAAAAGAAAAATCAAGTAGTTATATTGCTTGATCCAGAAAGACAGTTCATTCGCAGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCAGCCAGACCCTGTAGCAGAAATTGCTTTGACCGGGTTGAGATTGCTCGGGTTATGAATGCTGCCGGGCAGCGGCGAGATGCCCTTCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTGTTGCAGAACTTCTTCGATCTAGAGAAGTATCCTCTTCTTTCAGAACTCACTCACCGTTTCCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGTATAGATTAGCTATAGAAGAAGGAATATCAGTAACAACTACAGTATTAGCACAGTATCTAAAGCGGAGAGAAAACTTCTTCCAAGAGCTTGACTATGTTATTACAGACACTGTCAGAGGATCAGTCGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTATCATTCATTTCCTATGCCGATGACATGAATGCGCCTGATAACATTAGTTCTCTAATGGGACTTCTTGGCTCCATCCCAGACAATGCATTTCAGAAGAATCCAGTGGGAACAAATTGGGACCTCAATCATCGAATTGCATCAGTTTTATTTGGTGGTTTAAAACTCGCTGGTGTTGGATTTATTTCAAGTATTGGAGCTGTGGCTTCATCAAACTCTCTATTTGCAGTTCGTAAATTACTTAATCCAGCAATTATCACTGACCAACAGATTGCAAGGTCCCCAATACTCAAAACAGCTGTTGTTTATGCATTATTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGGGTAGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACCTTTCTTGTAAATTTGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACGCAGCAATGGATTGACATTGCACGCGATACTGGACTGCAAGTTAGAAAGACCGAGTCACCTGACCCACCTACATCAGATCCTCCAAATCAAGCTACAATCTTATGCAACGAATCAGATTCTCCAAATCAAGCTGCAATCTTATGCAACGAAGCAGAAGAAGCCAGCATCGATGAGATTAAAAGTGAATAA 2304 0.4484 MKPNTQASFATATPHVTYFHRATLSRAKPSQTHPPTLNQKTAKRRRVNLHLPHTNRIIAARKTEHHDGNDEVSESSVEQREWSRARSNRRGVLVAPFLAVGASFLLSSASTRAAEEEKATPVEVTVVKPEEMKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVEIDKRLSLAIEAFPSDLQEPLNQYIDKKIDGETLKTYTAHWPPERWQEYEPILSYCRENGIHLVACGTPLEILRTVQAEGISGLTKAERNLYAPPAGSGFISGFSSMSRRLSLDNTPNLSFPFGPSSYLSAQARVVDEYTMSQIILRSMLDGGATGMLIVVTGASHVTYGSRGTGVPARISRKLQKKNQVVILLDPERQFIRSEGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELTHRFQGFRERLLADPKFLYRLAIEEGISVTTTVLAQYLKRRENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFISYADDMNAPDNISSLMGLLGSIPDNAFQKNPVGTNWDLNHRIASVLFGGLKLAGVGFISSIGAVASSNSLFAVRKLLNPAIITDQQIARSPILKTAVVYALFLGISANLRYQIIAGVVEHRISDQFASQTFLVNLLSFVSRTINSYWGTQQWIDIARDTGLQVRKTESPDPPTSDPPNQATILCNESDSPNQAAILCNEAEEASIDEIKSE 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04366 767 Pfam Protein RETICULATA-related 489 673 IPR021825 -
Vivi3g04366 767 CDD ChanN-like 171 395 IPR007314 -
Vivi3g04366 767 MobiDBLite consensus disorder prediction 719 740 - -
Vivi3g04366 767 SUPERFAMILY EreA/ChaN-like 162 418 - -
Vivi3g04366 767 MobiDBLite consensus disorder prediction 62 83 - -
Vivi3g04366 767 Gene3D - 155 421 - -
Vivi3g04366 767 MobiDBLite consensus disorder prediction 24 43 - -
Vivi3g04366 767 Pfam Haem-binding uptake, Tiki superfamily, ChaN 163 382 IPR007314 -
Vivi3g04366 767 MobiDBLite consensus disorder prediction 24 38 - -
Vivi3g04366 767 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 39 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04366 Vivi-Chr3 78543005 78548300 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04366 - - mtr:11418002 1289.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04366 3 78543005 78548300 Vivi3g04366 3 78543005 78548300 ECH