Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi3g04351 | ATGCCTTCTTCTCTTCAGCTTGAGAGATTCAATCCTTCAACCGATGCAACCGCTTCAGCAGCCATCGCCAACGGTGTAAACTGTCCTAAACAACCACAAACTCCACCACCACCCACGGCAGCGCGTCGTCTTCACCACGCGCATATGGTGGGACTGGGATCCAACCAGTGTTGCTCCGTCGTGACTCAAAACATCGACGCACCCGTCTCCGCGGTATGGCCGGTGGTTCGACGCTTCGACAACCCGCAAGGATACAAGAACTTCGTAAAAAGTTGCCACGTCATTACCGGAGACGGCATTAACGTCGGTGCAGTCCGTGAGGTTCGCGTGGTTTCCGGGCTACCAGCTGAGTCGAGTACGGAGCGGTTGGAGATTCTCGACGATGAGCGACACGTCATCAGCTTCAGCGTTGTCGGTGGGGAACACCGTCTGAGAAACTATCGGTCGGTGACGACGCTTCATTCGGTAGACGGAAACAGGACACTTGTCATTGAGTCATACGTCGTTGATGTACCGCAAGGGAATACGAAGGAGGAAACGTGCGTTTTTGTTGACACTATCGTACGTTGTAATTTACAGTCGTTGGGTCAGATCGCTGAGAACATGATCAGAAACAATGTTTAA | 624 | 0.524 | MPSSLQLERFNPSTDATASAAIANGVNCPKQPQTPPPPTAARRLHHAHMVGLGSNQCCSVVTQNIDAPVSAVWPVVRRFDNPQGYKNFVKSCHVITGDGINVGAVREVRVVSGLPAESSTERLEILDDERHVISFSVVGGEHRLRNYRSVTTLHSVDGNRTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLGQIAENMIRNNV | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi3g04351 | 207 | CDD | PYR_PYL_RCAR_like | 57 | 200 | - | - | |
| Vivi3g04351 | 207 | PANTHER | - | 55 | 199 | - | - | |
| Vivi3g04351 | 207 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 57 | 197 | IPR019587 | - | |
| Vivi3g04351 | 207 | SUPERFAMILY | Bet v1-like | 56 | 198 | - | - | |
| Vivi3g04351 | 207 | Gene3D | - | 31 | 207 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vivi3g04351 | Vivi-Chr3 | 78298996 | 78300559 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi3g04351 | K14496 | - | gmx:121174020 | 310.842 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vivi3g04351 | 3 | 78298996 | 78300559 | Vivi7g02199 | 7 | 84780865 | 84782136 | ECH | |
| Vivi3g04351 | 3 | 78298996 | 78300559 | Vivi3g04351 | 3 | 78298996 | 78300559 | ECH | |
| Vivi3g04351 | 3 | 78298996 | 78300559 | Vivi7g02199 | 7 | 84780865 | 84782136 | PCT |