Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04346 ATGAATCCTCGGCATCTCGAACCTTATATAAACCGCCAATTCTTAATCAATGTCCGAAACATCCTACGTCTCATTTCCAAAACAACTCAAAACCTAATCATGTCTCAAACACAACCCTCTTCTTCTTCTCCCGACCCTCCACCTTTCGATCCCAACCAACCCTCCGTTCCCATTTCCTACCCAATCAAAACCCTCCAAGACCTTCAATCTCGCTCTTACTTCGATTCCTTTCACTACCCTTTTAACATATCTTCAGTTCCCATTTCTTCTTCCAAGCTTCCCAATAGGCGTAGGTTGTTGGTTTGTCATGATATGGCTGGTGGTTACTCCGATGATAAGTGGATTCAAGGTGGTAGTAATCCTGATGCTTATGCTATTTGGCATTGGCATTTGATTGATGTTTTTGTTTACTTTTCTCATTCGTTGGTTACTCTTCCTCCTCCTTGTTGGGTTAACACTGCTCATCGTCATGGTGTCAAGGTGTTGGGAACTTTCATCACCGAATGGGAAGAAGGAAAGGCTACCTGTGATGTACTCCTTTCAACAAAGGAGTCTGCACAAATGTATGCAGAACGTCTGACCGAGCTTGCTGTTCGTTTAGGCTTCGACGGGTGGCTAATAAATATGGAGGTAAAGTTGGATCCCAAGCAAATTCCTAATTTGAAAGAGTTTGTAGACCATTTGTCATTAACAATGCATTCCTCATTGCCTGGATCATTAGTGGTGTGGTATGACAGTGTTACAATTGATGGTGAACTGAATTGGCAAGATCAACTAAACGAATATAATAAGCCGTTCTTTGATATATGTGATGGAATATTTGTAAACTATACATGGAAGGAAAGCTATCCAAAGCTCTCTGCTGATGTGGCTGGTGATCGGAAGTTCGACGTTTACATGGGAATTGATGTATTCGGAAGGAACACATATGGCGGTGGACAGTGGAATGCAAATGTTGCTCTTGATGTAATAAGAAAGAATGAAGTCTCTGCTGCAATATTTGCTCCCGGATGGGTCTACGAAACAAAGCAACCACCAGATTTTGAGACTGCTCAGAATAGTTGGTGGGGTCTCGTGGAGAAATCTTGGGGAGTACTGCCAAATTATTCTGGACCACTACCGTTACATACGAATTTTGATCAGGGACGCGGTTATCACATTTCAGTTGATGGAAACAACGTATCAGATGCTTCGTGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCCTTCCGCTTGCTGATACTAGAAATCCTATTCAAGTTACTGTAGACTTGAAGGAAGCATCATATAGTGGAGGGGGGAACCTTACATTCAAAGGATCTCTTGATAAGCAAACTTATTTTGAGACGAAAATCCTCCAAGGCGAGTTTCTTTTGACCGAGTTGCCTATCCACTTTACTTATTCGGTGAAATCTAATGGCAATTCTTCGTTAGGACTTAAACTCGTGTTCACTTCAAACAAAGACCAAACAGTTTCTGCACTTCTCACATCGCAGGAAGTGAATCATTTCTCAAGTAAATTCGACAAAGTAATCACAACACGCAAACAAAAGGAGGTTTCCTCTGGATGGGTTATAAACGAAAGTGAAATTGAAATGAATGGATACACTTTAACCGAAATCTATGCAGTGTGCTACCGATCAGATTCCTCATTATCAGACTATTATGCACTTCTTGGTCACATCACAGTCAAGAGTTCCAACTACAATCCAGATTTTCCCGTTTCATCTTCCTGGCTAGTCGACGGCAAATTTATAAAATGGACATCAGGCTCCAACGGTTCTAAGACGCTTAGCATTAAACTTTCATGGACACTAAAAGATGGAAAGAATTATCTCTCTCTGAAGTACAACATCTATGTGGTGAAATCATCAAAACAAGCAGGTGATAATCCAAGTAGAACTTCAAAGTCTGTGAAGGAGGAGTACCTTGGAGTAGCACAAGTAAACTGCTTTTATGTTTCTGATCTTGAAATTCCTTCAGATAGTTCTAGCCTCAAATTTATAATACAAGTTTGTAGTGTGGATGGGACAATTCAGGCATTGAATGATTCTCCATATTATGAATTGAAGGTTGAAAGTCCCTAA 2091 0.4084 MNPRHLEPYINRQFLINVRNILRLISKTTQNLIMSQTQPSSSSPDPPPFDPNQPSVPISYPIKTLQDLQSRSYFDSFHYPFNISSVPISSSKLPNRRRLLVCHDMAGGYSDDKWIQGGSNPDAYAIWHWHLIDVFVYFSHSLVTLPPPCWVNTAHRHGVKVLGTFITEWEEGKATCDVLLSTKESAQMYAERLTELAVRLGFDGWLINMEVKLDPKQIPNLKEFVDHLSLTMHSSLPGSLVVWYDSVTIDGELNWQDQLNEYNKPFFDICDGIFVNYTWKESYPKLSADVAGDRKFDVYMGIDVFGRNTYGGGQWNANVALDVIRKNEVSAAIFAPGWVYETKQPPDFETAQNSWWGLVEKSWGVLPNYSGPLPLHTNFDQGRGYHISVDGNNVSDASWCNISCQGFQPLLPLADTRNPIQVTVDLKEASYSGGGNLTFKGSLDKQTYFETKILQGEFLLTELPIHFTYSVKSNGNSSLGLKLVFTSNKDQTVSALLTSQEVNHFSSKFDKVITTRKQKEVSSGWVINESEIEMNGYTLTEIYAVCYRSDSSLSDYYALLGHITVKSSNYNPDFPVSSSWLVDGKFIKWTSGSNGSKTLSIKLSWTLKDGKNYLSLKYNIYVVKSSKQAGDNPSRTSKSVKEEYLGVAQVNCFYVSDLEIPSDSSSLKFIIQVCSVDGTIQALNDSPYYELKVESP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04346 696 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 23 690 IPR032979 GO:0033925
Vivi3g04346 696 FunFam cytosolic endo-beta-N-acetylglucosaminidase 51 368 - -
Vivi3g04346 696 Gene3D - 372 567 - -
Vivi3g04346 696 Gene3D Glycosidases 52 366 - -
Vivi3g04346 696 MobiDBLite consensus disorder prediction 34 53 - -
Vivi3g04346 696 Pfam Glycosyl hydrolase family 85 109 386 IPR005201 GO:0005737|GO:0033925
Vivi3g04346 696 CDD GH85_ENGase 100 419 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g04346 53 694 Glycoside Hydrolase AT5G05460 56.794 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04346 K01227 - gmx:100804658 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04346 3 78225659 78229621 Vivi3g04346 3 78225659 78229621 ECH