Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g04297 ATGGCTTCGTTATGGCGCGCTGGGACCAAGTTAACTCTACTAGCATCCGCCCTCGGCGGCGGTGGCGCAGCGGCGCTCATTGCCACCTCCGACGATCCTGCAACGGCGTTCAGTCTCTCCACAACCATCCCTCGTCGACTCTTTGCCGACGCCGTCGCTGCCGCCAACATTGTGTTCGATTATGAATATTCACTATGGGGAGTTCCGGAAGGGAGTACTGAGAGGGAGAAAGTGAAGCATGAAGTTCATCTCCGTTCAGCAGAAAAACTTCGAGACCTGTGTTTTAAGAATGGAGGGATTTATATAAAGCTCGGGCAACATCTCGGGCAATTGGAATACTTAGTTCCTAAAGAATATGTTCAGACCATGAGGGAGTCCATGCTAAATAGATGTCCGGTTTCTTCGTATGAACAAATATGTAGTGTATTCAAGAAAGAGTTTGGAGAGACACCAGATAAAGTATTTGCCGAGTTCGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCGCAAGTTCACATAGCCCGCACACATGATGGCCAGAAAGTTGCTGTGAAGGTCCAACATTCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTAGAATTGATTGTGAATACTCTGCATAATTTTTTCCCCAGTTTTGATTACAGGTGGTTGATTGACGAGATTAAAGAGAGTTTACCTCAGGAATTGGACTTTTTAACGGAGGCAAAAAACAGTGAGAGGTGTTTGGAGAACTTCCGTAAGTTGTCTCCGCATATCGCAAATTATGTATATGCACCAAAAGTATATTGGAATCTGAGTTCGTCAAAGCTGCTTACAATGGAATACATTGATGGTGCTTATGTAAATGATGTGAAGGCCATCAAGAAACTGGGGATCCGTCCACATGAACTTTCAATATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTACACTGTGATCCACATGCTGCAAATTTGTTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATCCTGGGCTGGAGAAAACCACAGTTGATTCTTTTAGACCACGGACTCTATAAAGAGCTTGACTTCAATACAAGAACTAATTATGCTGCATTATGGAAGGCGTTGATATTTGCTGATGCTAATGCAATCAAGGAATACAGTACAAAGTTGGGTGCTGGGGAGGATTTATATGCACTTTTTGCTGGAGTTCTAACAATGAGACCTTGGAATAGAGTTGTTGACCCATCGATGGATCACTTAGTTATACAGGGTAGTCAGAGTGAACTATCCGAACTTCAGATGTATGCTTCTGAATATTTCCATGAAATCTCAGAGCTTCTAAGGAGATTACCACGTGTGATTCTTCTAATGATGAAGACAAATGATTGTTTAAGGGCAGTCAACAATACCCTGATACAGGGATCACATCTTGAAACATCTCTGAAGACATCTTGTATCATTGGAAGGGTTTCTTCTGAGGCTGTCTCTGCGGCAAAAATGTCACAAAGCAAGTCAGTTCTAACTTGGTTTAGCGTTAAATTGGATAAGATTTTGCTGGAAATACAGATTTGGAAAATACAGATGGCCCTGTGGCTTTTGCAACTGAGAAAGGCGTTGCCTTGGTCTCACAGAGCATCATAA 1638 0.4335 MASLWRAGTKLTLLASALGGGGAAALIATSDDPATAFSLSTTIPRRLFADAVAAANIVFDYEYSLWGVPEGSTEREKVKHEVHLRSAEKLRDLCFKNGGIYIKLGQHLGQLEYLVPKEYVQTMRESMLNRCPVSSYEQICSVFKKEFGETPDKVFAEFDPVPIASASLAQVHIARTHDGQKVAVKVQHSHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSERCLENFRKLSPHIANYVYAPKVYWNLSSSKLLTMEYIDGAYVNDVKAIKKLGIRPHELSILVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASILGWRKPQLILLDHGLYKELDFNTRTNYAALWKALIFADANAIKEYSTKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGSQSELSELQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLIQGSHLETSLKTSCIIGRVSSEAVSAAKMSQSKSVLTWFSVKLDKILLEIQIWKIQMALWLLQLRKALPWSHRAS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g04297 545 CDD ADCK1-like 126 390 IPR045307 -
Vivi3g04297 545 PANTHER ABC1 FAMILY PROTEIN 35 480 - -
Vivi3g04297 545 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
Vivi3g04297 545 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g04297 Vivi-Chr3 77065748 77081201 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g04297 K08869 - gmx:100796182 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g04297 3 77065748 77081201 Vivi3g04297 3 77065748 77081201 ECH